Reverse Dependencies of hdmf

The following projects have a declared dependency on hdmf:

• allensdk — core libraries for the allensdk.
• dandi — Command line client for interaction with DANDI archive elements
• filterframework-to-nwb — Convert files from Loren Frank Lab old matlab format to NWB 2.0
• franklab-nwb-extensions — Frank lab nwb specific extensions
• hdmf-ai — A schema and API for storing the results from AI/ML workflows
• hdmf-docutils — Collection of CLIs, scripts and modules useful to generate the NWB documentation
• hdmf-ml — A package for using the HDMF-ML schema
• hdmf-zarr — A package defining a Zarr I/O backend for HDMF
• hdmf_zarr_bjh — A package defining a Zarr I/O backend for HDMF - forked to fix a bug
• jaeger-lab-to-nwb — NWB conversion scripts and tutorials.
• kyutils — kyu's utils
• lincbrain-cli — Command line client for interaction with LINC Brain archive elements
• ndx-acquisition-module — NWB extension to add acquisition module
• ndx-binned-spikes — to-do
• ndx-dbs — This extension is developed to extend NWB data standards to incorporate DBS(DeepBrainStimulation) experiments.
• ndx-depth-moseq — Extension for MoSeq-extract output
• ndx-dynamic-routing-metadata — Type to store metadata for dynamic routing experiments at Allen Institute
• ndx-extract — NWB extension for storage of parameters and output of EXTRACT pipeline.
• ndx-fiber-photometry — This is an NWB extension for storing fiber photometry recordings and associated metadata.
• ndx-fllab-novela — NovelaNeurotechnologies Namespaces
• ndx-franklab-novela — NovelaNeurotechnologies Namespaces
• ndx-hed — NWB extension for HED data
• ndx-lflab-novela — NovelaNeurotechnologies Namespaces
• ndx-multichannel-volume — extension to allow use of multichannel volumetric images
• ndx-nirs — An NWB extension for storing Near-Infrared Spectroscopy (NIRS) data
• ndx-odor-metadata — NWB Extension for documenting odor stimulus metadata
• ndx-optogenetics — Representing optogenetics devices and surgeries
• ndx-patterned-ogen — patterned (holographic) optogenetic extension to NWB standard
• ndx-photostim — Holographic photostimulation extension to NWB standard
• ndx-pinto-metadata — The NWB extension for storing ViRMEN experimental metadata for the Pinto lab.
• ndx-pose — NWB extension to store pose estimation data
• ndx-probeinterface — Extension for defining neural probes in the probeinterface format
• ndx-sound — Represent acoustic stimuli and responses
• ndx-subjects — An NWB extension for custom species metadata.
• ndx-turner-metadata — The NWB extension for storing Turner lab specific metadata
• ndx-whisk — NWB extension to store whisker tracking measurements computed with Whisk (Janelia Whisker Tracker) or other video-based whisker tracking methods.
• ndx-zebrafish — NWB extensions for storing (larval) zebrafish expreiment related data
• neuroconv — Convert data from proprietary formats to NWB format.
• np-vba — Python package for analyzing behavioral data for Brain Observatory: Visual Behavior. Forked to specify dependencies in pyproject.toml and support Python >3.7.
• npc-sessions — NWB-conversion for behavior and epyhys sessions from the Mindscope Neuropixels team, in the cloud.
• nwb-conversion-tools — Convert data from proprietary formats to NWB format.
• nwb-docutils — Collection of CLIs, scripts and modules useful to generate the NWB documentation
• nwb4fp — Description of my package
• nwb4fprobe — Description of my package
• nwbext-simulation-output — Extension for storing large-scale simulation output in the Neurodata Without Borders: Neurophysiology format
• pynwb — Package for working with Neurodata stored in the NWB format.
• silverlabnwb — Python tools for working with Silver Lab data in the NWB2 format
• spyglass-neuro — Neuroscience data analysis framework for reproducible research