Reverse Dependencies of hail

The following projects have a declared dependency on hail:

• AoUPRS — AoUPRS is a Python module for calculating Polygenic Risk Scores (PRS) specific to the All of Us study
• batchutils — Methods and functions that support the overall operations of code based on Hail Batch.
• cap-genomics — Cohort Analysis Platform
• cpg-flow — CPG Flow API for Hail Batch
• dnarecords — Genomics data ML ready
• findhere — Locate paths using relative path names locally and in the Cloud.
• gentropy — Open Targets python framework for post-GWAS analysis
• gwaspy — GWASpy: A Python package for performing GWAS QC, PCA, phasing, and genotype imputation.
• joint-calling — Pipeline for joint calling, sample and variant QC for WGS germline variant calling data
• landerslabutils — Landers Lab utilities for ALS compute project
• larcoh — Pipeline for joint calling, sample and variant QC for WGS germline variant calling data in large cohorts
• PheTK — The Phenotype Toolkit
• snppy — Codebase for running common variant association analyses.
• snputils — Process diverse genomes with ease
• sparkhub — Cloud utilities for running Hail systematically.
• sparkhub2 — Cloud utilities for running Hail systematically.
• SPCAncestry — SPCAncestry: A Python package for inferring population ancestry.
• step-pipeline — Pipeline library that simplifies creation of pipelines that run on top of hail Batch and other compute enviornments
• str-analysis — Utilities for analyzing short tandem repeats (STRs)
• ukbb-common — Common functions for UK Biobank Data
• wdlplay — Python library for submitting wdl scripts using caper.