graphbin

View on PyPIReverse Dependencies (1)

1.7.4 graphbin-1.7.4-py3-none-any.whl

Wheel Details

Project: graphbin
Version: 1.7.4
Filename: graphbin-1.7.4-py3-none-any.whl
Download: [link]
Size: 83678
MD5: eff7bb11919efdf64cd91e163702c797
SHA256: f1eef0c662253c133a61e8757d5a356a15e9edf6ae4ce6ceb285dd869cbe28a3
Uploaded: 2024-08-19 05:31:44 +0000

dist-info

METADATA

Metadata-Version: 2.1
Name: graphbin
Version: 1.7.4
Summary: GraphBin: Refined binning of metagenomic contigs using assembly graphs.
Author-Email: Vijini Mallawaarachchi <viji.mallawaarachchi[at]gmail.com>, Anuradha Wickramarachchi <anuradhawick[at]gmail.com>, Yu Lin <yu.lin[at]anu.edu.au>
Project-Url: Bug Tracker, https://github.com/metagentools/GraphBin/issues
Project-Url: Documentation, https://graphbin.readthedocs.io/en/latest/
Project-Url: Source Code, https://github.com/metagentools/GraphBin/
Keywords: genomics,bioinformatics
Classifier: Development Status :: 5 - Production/Stable
Classifier: Intended Audience :: Science/Research
Classifier: License :: OSI Approved :: BSD License
Classifier: Topic :: Scientific/Engineering :: Bio-Informatics
Classifier: Programming Language :: Python :: 3.7
Classifier: Programming Language :: Python :: 3.8
Classifier: Programming Language :: Python :: 3.9
Classifier: Programming Language :: Python :: 3.10
Requires-Python: >=3.7
Requires-Dist: igraph
Requires-Dist: cogent3
Requires-Dist: cairocffi
Requires-Dist: click
Requires-Dist: black; extra == "dev"
Requires-Dist: click; extra == "dev"
Requires-Dist: docformatter; extra == "dev"
Requires-Dist: flit; extra == "dev"
Requires-Dist: nox; extra == "dev"
Requires-Dist: isort; extra == "dev"
Requires-Dist: pytest; extra == "dev"
Requires-Dist: pytest-cov; extra == "dev"
Requires-Dist: pytest-xdist; extra == "dev"
Requires-Dist: nox; extra == "test"
Requires-Dist: pytest; extra == "test"
Requires-Dist: pytest-cov; extra == "test"
Requires-Dist: pytest-xdist; extra == "test"
Provides-Extra: dev
Provides-Extra: test
Description-Content-Type: text/markdown
[Description omitted; length: 8464 characters]

WHEEL

Wheel-Version: 1.0
Generator: flit 3.9.0
Root-Is-Purelib: true
Tag: py3-none-any

RECORD

Path Digest Size
graphbin/__init__.py sha256=Ou2-S_OuNfkuqTRT8_LQOuNQ6z5nKZWWAv0wl7cgI0A 410
graphbin/cli.py sha256=NkoJbIndKQXyWajbsinD3CtkjjjM93Za6FBzSeriR4Y 6259
graphbin/graphbin_Canu.py sha256=k1-sXuTlcFF1XCfXJwEHS45GJWfifNJzZGFqv7sMTvw 3893
graphbin/graphbin_Flye.py sha256=LJOc1iVEsmhY224H3RIF1-5i_fsBb02iK7-ldmqpWMU 4174
graphbin/graphbin_Func.py sha256=oNwW1smrQANl3vj6cRPZtME00C8YaFDyM0b3SqM1vSI 10131
graphbin/graphbin_MEGAHIT.py sha256=UgV0ji_oZlwCUMd5eGzvFxs_BXjJdjwdF-2MymJH518 4287
graphbin/graphbin_Miniasm.py sha256=ajMgqF80nB71tc-TfiHRLM6_mshodvk1IpbB_VGtU6Y 3940
graphbin/graphbin_SGA.py sha256=eo5p8h6I_eBJDpDKpkHeA4UTDxjSprQDQzxjRzznqhU 4142
graphbin/graphbin_SPAdes.py sha256=AR-r8qfcYquT8UrmTBQGRtU3dgo0WTztblzpnGcAYKI 4126
graphbin/bidirectionalmap/__init__.py sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU 0
graphbin/bidirectionalmap/bidirectionalmap.py sha256=AjM_I6e8X-trDc1qFNSsTYs03fCKkhMals5w2rM86rk 1099
graphbin/labelpropagation/__init__.py sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU 0
graphbin/labelpropagation/labelprop.py sha256=MIeNdSezzgJUsI58pj9xVSl970vO1FZb34_2fzLHnXI 8132
graphbin/parsers/__init__.py sha256=jl4dtB1L17gZCPJeQoMrQpZ50VzqXxrZWyu7K5vu4DU 1324
graphbin/parsers/canu_parser.py sha256=OsIqZ4RpCoxvCCou9v2sUjcP0M_NUspjiwbNzbigQ-E 6585
graphbin/parsers/flye_parser.py sha256=3jJVbtrlE0pA9bF3e3QQB7rivRGn8zvtgGh5_4ARl9Y 10232
graphbin/parsers/megahit_parser.py sha256=r86sGrQ7EgYOY3mel85FekcyrZvfp8LXiPKM58Ev0qo 7460
graphbin/parsers/miniasm_parser.py sha256=pokMdf3hmP8rT_JnfrlYlhU5yHg_fhDEdgt99SQoVe0 6554
graphbin/parsers/sga_parser.py sha256=OqamKetjabpwULlowJatRywtIiLct3_16tCuoWF0Oyc 7048
graphbin/parsers/spades_parser.py sha256=e6ExJMBgYS_zr_P_Lee_ywPZweZPLuGQE_qTvOBzyPk 8691
graphbin/support/gfa2fasta.py sha256=LPMvi38cSWZUxljhIh0qpTw6xzjG0xznyhV0qnIcFSQ 3649
graphbin/support/prep_result.py sha256=RjwxrmDphyGR9uM6BX3Jwm__5TWNGmFcBQnB6z_jc4c 5286
graphbin/support/visualise_result_Flye_Canu_Miniasm.py sha256=oZ4ujYIYxNSgjLLg04bSn_fpjH125uWxOvP5tvyl1tc 12281
graphbin/support/visualise_result_MEGAHIT.py sha256=GOpmuI-pp1bGHp4XjXUXtLOpZ21tKA4i7v8OOlHjq7g 14339
graphbin/support/visualise_result_SGA.py sha256=gmz6UfawRogvlQBlMr-2TCgcfaL0pz4NlntCqBnGLC4 12309
graphbin/support/visualise_result_SPAdes.py sha256=wfMDq9IelF3LnffgPsJI14Lehm_Iiwp48H_d2DFp754 15587
graphbin/utils/graphbin_Canu.py sha256=hrvAZHoH-1Wl1TMFfVpuydFy_6ZgBC-gHIE7gsdXqgU 4516
graphbin/utils/graphbin_Flye.py sha256=cP7eepGh6CFshi1sO2b-b3w5vc3iNjel0O5R7fdSYlE 4677
graphbin/utils/graphbin_Func.py sha256=hqJh0KJfurTAFizV482wQq79Hve3GSimGe4RCqVYWao 10141
graphbin/utils/graphbin_MEGAHIT.py sha256=sdlnSiNPoNLjtbgHS2lUKrjfjxo87YMrVqjfbrm4PSo 4790
graphbin/utils/graphbin_Miniasm.py sha256=YAonIgsvAvjZS8yI4mTyrZiPM3wwAkTXodpoasojoSY 4442
graphbin/utils/graphbin_Options.py sha256=KnmCGVGOEzYNSlvGZWbZsS8s8YH-elPaHsxPds18NLM 1612
graphbin/utils/graphbin_SGA.py sha256=MS2hjZ-x-ys-cxM2EWG_47fzFu9toz4d29WYSMaGMec 4649
graphbin/utils/graphbin_SPAdes.py sha256=awotrGrurifSVnazM2c7kLPFPaORmi23aCnXmx1ee2o 4741
graphbin/utils/parsers/__init__.py sha256=-B6oKSEmnUw0462BHXb2dBjPm_L5-sKgejCHF41yry8 1329
graphbin/utils/parsers/canu_parser.py sha256=Uj7C6JN9LGLDpLsteyTchnOv0bDgyVkQs3KZxDPV7HU 6621
graphbin/utils/parsers/flye_parser.py sha256=zUXs4mSPkpSYXDMBlciQ796EAM0qNPgiulhnWn7-5kc 10268
graphbin/utils/parsers/megahit_parser.py sha256=8tBMS93byKKUOkSFxa6m49mLKm7eNxTyCbeuuKHaNWM 7496
graphbin/utils/parsers/miniasm_parser.py sha256=SFc7sYRmSDivgdHEy8pXasLpY8MIl6SZWH63goTqUV0 6590
graphbin/utils/parsers/sga_parser.py sha256=-wW-qfxEDYi_Bj7dXboQVVbdPUTc7V3cih-F02-gQX8 7084
graphbin/utils/parsers/spades_parser.py sha256=TA13vtvPJwQyM_ULpBRJpnl5p3gH_MmwcbRDE_8gOIc 8727
graphbin-1.7.4.dist-info/entry_points.txt sha256=yqJONG6FHbZnLrIG5ctUeBc09q5ULiLCMeXXWAZARio 46
graphbin-1.7.4.dist-info/LICENSE sha256=qD7WtKNr0hXULFPPrm9V9Cuv6oDJT24HrZ6f3xyBuAE 1530
graphbin-1.7.4.dist-info/WHEEL sha256=EZbGkh7Ie4PoZfRQ8I0ZuP9VklN_TvcZ6DSE5Uar4z4 81
graphbin-1.7.4.dist-info/METADATA sha256=TFhK2NFNUoLNkpuo6oXB7Fffam7neWNdN7btywimM9w 10138
graphbin-1.7.4.dist-info/RECORD

entry_points.txt

graphbin = graphbin.cli:main