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genophenocorr

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0.1.0 genophenocorr-0.1.0-py3-none-any.whl

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Project: genophenocorr
Version: 0.1.0
Filename: genophenocorr-0.1.0-py3-none-any.whl
Download: [link]
Size: 42763
MD5: efaa38b1787697182dc92c3ce0bda29e
SHA256: 8a0c821b48dd58e39806f017325b367e9599ac2c88105e86c8258fb0c97dedd4
Uploaded: 2023-09-28 20:37:04 +0000

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METADATA · WHEEL · RECORD · top_level.txt

METADATA

Metadata-Version: 2.1
Name: genophenocorr
Version: 0.1.0
Summary: Search for genotype-phenotype correlations with GA4GH phenopackets
Author-Email: Lauren Rekerle <lauren.rekerle[at]jax.org>, Daniel Danis <daniel.danis[at]jax.org>, Peter Robinson <peter.robinson[at]jax.org>
Project-Url: homepage, https://github.com/monarch-initiative/genophenocorr
Project-Url: repository, https://github.com/monarch-initiative/genophenocorr.git
Project-Url: documentation, https://monarch-initiative.github.io/genophenocorr/stable
Project-Url: bugtracker, https://github.com/monarch-initiative/genophenocorr/issues
License: MIT License Copyright (c) 2023, The Monarch Initiative Permission is hereby granted, free of charge, to any person obtaining a copy of this software and associated documentation files (the "Software"), to deal in the Software without restriction, including without limitation the rights to use, copy, modify, merge, publish, distribute, sublicense, and/or sell copies of the Software, and to permit persons to whom the Software is furnished to do so, subject to the following conditions: The above copyright notice and this permission notice shall be included in all copies or substantial portions of the Software. THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE SOFTWARE.
Keywords: Global Alliance for Genomics and Health,GA4GH Phenopacket Schema,Human Phenotype Ontology,GA4GH,Genotype-phenotype correlation,HPO
Classifier: License :: OSI Approved :: MIT License
Classifier: Operating System :: OS Independent
Classifier: Development Status :: 3 - Alpha
Classifier: Programming Language :: Python :: 3.5
Classifier: Intended Audience :: Science/Research
Classifier: Topic :: Scientific/Engineering :: Bio-Informatics
Requires-Python: >=3.5
Requires-Dist: hpo-toolkit (>=0.3.0)
Requires-Dist: protobuf (>=3.15.0)
Requires-Dist: pandas (>=2.0.0)
Requires-Dist: phenopackets (>=2.0.2)
Requires-Dist: requests (>=2.25.0)
Requires-Dist: scipy (>=1.11)
Requires-Dist: statsmodels (>=0.13.0)
Requires-Dist: numpy (>=1.23)
Requires-Dist: sphinx (>=7.0.0); extra == "docs"
Requires-Dist: sphinx-rtd-theme (>=1.3.0); extra == "docs"
Requires-Dist: sphinx-copybutton (>=0.5.0); extra == "docs"
Requires-Dist: pytest (>=7.0.0); extra == "test"
Provides-Extra: docs
Provides-Extra: test
Description-Content-Type: text/markdown
License-File: LICENSE
[Description omitted; length: 1932 characters]

WHEEL

Wheel-Version: 1.0
Generator: bdist_wheel (0.41.2)
Root-Is-Purelib: true
Tag: py3-none-any

RECORD

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genophenocorr/analysis/__init__.py sha256=xf76VURjTChNSaXijTOE-zmINNHhGsIzrXTCIsBj6As 100
genophenocorr/analysis/_analyzers.py sha256=yddiJUCDvzX4wjsm_qEp6w9232BpS5qcn5E0SvJdxcY 28377
genophenocorr/analysis/_inheritance.py sha256=jef0kvU4Rr31kz8PqfdBSeEkx0A2rRi_6_DkTmFUSoY 720
genophenocorr/analysis/_test_fisherExact.py sha256=UyqI2nV4Kc43tPuxUffvMOPWQ7em6k0di5LdQ5dhqxw 1158
genophenocorr/analysis/predicate/__init__.py sha256=KIJBKl5I1hrAk5Sv8BBmV7Jp7NOY83jXaTcJJ_wbHck 549
genophenocorr/analysis/predicate/_all_predicates.py sha256=Vl5sWZYDYawY5jMlmJ3MDUYFwr1P3bR0h2E8sNaJBn8 11566
genophenocorr/analysis/predicate/_api.py sha256=dRuGr6CWMAyGmtMIwcutY0T_lHGNxhx3Kq01vWUuTQA 2226
genophenocorr/constants/__init__.py sha256=rmy-q4iiIYIF-0am7Vc47u-xIGeaEKbcL_CikSMDGVE 42
genophenocorr/constants/variant_effects.py sha256=u5CUlG3en7dvtl2BY2Mv1vHLY5uPIvxxmzEY45-YWME 1777
genophenocorr/data/__init__.py sha256=Qmp_riI5wiNSNu8d2wroz8V12rZ_rLySi_jPzZ4jCNw 63
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genophenocorr/model/_variant.py sha256=cvELt8_tEyez9xtWYnQBvL4ZXfZerEEk-XZ6W4UQ80U 16416
genophenocorr/preprocessing/__init__.py sha256=MuInb5ZMJYzJBpBQv9rzaeLfYznMim-tqEcFvf7e8K4 1093
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genophenocorr/preprocessing/_phenopacket.py sha256=4SZRfrt6kNnpZFGmUB7ltMyEHvEOFQ--QBkslo_8L0o 8990
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genophenocorr/preprocessing/_protein.py sha256=GMHJeXNkBYqtzxT8j8zIuAfDmYBjmcTfad4bqZaxsrk 4082
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genophenocorr-0.1.0.dist-info/RECORD — —

top_level.txt

genophenocorr