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0.2.8 genomkit-0.2.8-py3-none-any.whl

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Project: genomkit
Version: 0.2.8
Filename: genomkit-0.2.8-py3-none-any.whl
Download: [link]
Size: 45471
MD5: 19a0d829879cce7bf3f5cd31dcb052f8
SHA256: b7012f44115243e6323079ead9ec8226d6879a7e4c8cef453e7fab60f2e8d96f
Uploaded: 2024-04-08 08:58:46 +0000

dist-info

METADATA · WHEEL · RECORD · top_level.txt

METADATA

Metadata-Version: 2.1
Name: genomkit
Version: 0.2.8
Summary: genomkit
Author: Chao-Chung Kuo
Author-Email: chao-chung.kuo[at]rwth-aachen.de
Home-Page: https://github.com/chaochungkuo/genomkit
Classifier: Programming Language :: Python :: 3
Classifier: License :: OSI Approved :: MIT License
Classifier: Operating System :: OS Independent
Requires-Dist: intervaltree
Requires-Dist: numpy
Requires-Dist: pandas
Requires-Dist: pyBigWig (==0.3.22)
Requires-Dist: pysam (==0.22.0)
Requires-Dist: scipy
Requires-Dist: tqdm
Description-Content-Type: text/markdown
License-File: LICENSE
[Description omitted; length: 3269 characters]

WHEEL

Wheel-Version: 1.0
Generator: bdist_wheel (0.37.1)
Root-Is-Purelib: true
Tag: py3-none-any

RECORD

Path Digest Size
genomkit/__init__.py sha256=tHo2RdqYQOJoO4RWWh44pWZdHPzgMVWoocKvPjhdEWk 564
genomkit/alignments/__init__.py sha256=-97YLz7NZiYLuUEmfq7iMN5hz-FPpjj13ihF9PqfO-k 425
genomkit/alignments/galignments.py sha256=gqgMVAsWSzxM3cFUYKZH3hftMzTL7e7c6adVGZDxiws 1621
genomkit/annotation/__init__.py sha256=4B6AmtlUnMj-5a_IKOQmfdnqtTuEZka3SqbDv97a1bo 210
genomkit/annotation/gannotation.py sha256=UzkjI-nXu3F8KioDs-_kPMyAioNsyovQ26Vs-vUlR_8 9130
genomkit/coverages/__init__.py sha256=7jzXnKNE3RsYgDMSNq_snsBko_PjQyCF1MgaPyRVEC8 209
genomkit/coverages/gcoverages.py sha256=HN94qedwzUm3VtxzOpqb_5Kfc_ynGvZ2QAxN9cKSJO8 11782
genomkit/coverages/gcoverages_set.py sha256=pbQmUeXX1ShZpn2HkYZB0oMlVihQwmjCPVPO650EKVs 2439
genomkit/data/chrom_size/chrom.sizes.hg19 sha256=ahJuo3-1RKN-MfkDnGqzKrz5pvbyKYgaC5y9KtL8sdk 375
genomkit/data/chrom_size/chrom.sizes.hg38 sha256=APbkrO4XLU6139LYv-sl3zCZDXKO2UcKsbxCQXIkgRc 375
genomkit/data/chrom_size/chrom.sizes.mm10 sha256=ku_VAX4a3I3ZIfbUZkTBNZ5Y3R9dR4-UDC6ClJ1Sku0 330
genomkit/data/chrom_size/chrom.sizes.mm39 sha256=LjGgLli0kD8nxwaPGq2OdCqjd9ubHe5Q5ligKPTOcu8 331
genomkit/data/chrom_size/chrom.sizes.mm9 sha256=RxZ4QAx9usQH4M0ccpWhgPs-3VJpLqh-_nxa94n8cU0 330
genomkit/data/chrom_size/chrom.sizes.tair10 sha256=gDqBtHfiyQymjeGKwM-kSw8zkaFbB-iMagJqOCDxB4k 96
genomkit/data/chrom_size/chrom.sizes.zv10 sha256=-d8DsTnIcDOq0CphrTC8a_i_lwIoKWGhjsfUhHSw31Q 377
genomkit/data/chrom_size/chrom.sizes.zv9 sha256=N8JJwXje51sVsXWLxYk3RNFdxJuKZ-ySIaLWfdSjiCA 377
genomkit/regions/__init__.py sha256=TSDZBCVynWM1WKxCpJawfdWfsR-EyjoYcoFS_6LzD9E 455
genomkit/regions/gregion.py sha256=gGjFntYyS4phsngODysLcFb1iN4JVkRSrn_o6m0itJI 10200
genomkit/regions/gregions.py sha256=vgHMBL-0wuY1nHWDUSy07VM1Vv2oYjiR-4XqrMjFCh4 45268
genomkit/regions/gregions_intervaltree.py sha256=Hy05CLm0aIPbGFS1YYl4YrlZPFb5ESNJfvdstlb6xow 33114
genomkit/regions/gregions_set.py sha256=aM5IKKYJXjRcNk5r3brjKGVZOhJwTdZhH-h-FCidO40 5841
genomkit/regions/io.py sha256=jtCPujft3MjTDF2cnXN5HkM3iyjw1IaMwKcdLiiAzlI 5253
genomkit/regions/util.py sha256=G4yGRolC9Ycz5_Wq-qV0zwj3zbWjVpRjfSWoBa-jEwU 913
genomkit/sequences/__init__.py sha256=Uuep2g0HgGZ6vMt9gtcGLBvuvujMSz_rPd0L0qgJ-wg 367
genomkit/sequences/gsequence.py sha256=0B1Wo2Qsf7naFRlpy9Y9vOVeV8Aqjwk0SCNKdNXJI7Y 3674
genomkit/sequences/gsequences.py sha256=hBBebLyS6J2zdyknsy50ju1nfsZJHsKXwHXQEjwM38E 4583
genomkit/sequences/io.py sha256=H3c0uGF1bcjMO3Ax7cD_p75tZcbUVZ-PieV__6kKHD8 5738
genomkit/variants/__init__.py sha256=PdjVUAkhRoa7atkEcJIeroHEKEeTdbBnfK6MT_PvVHg 328
genomkit/variants/gvariant.py sha256=UIiCf6mLvWETig9GqazjtVO0csgjVdXF95epU2FrEPg 789
genomkit/variants/gvariants.py sha256=46gmQViGrbp_O4GCNGKuWmM0MpYS7EhsCxGFZv83Q2Q 2172
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tests/test_gregion.py sha256=PR46w_w5H9TKDzVkcxsloaKQ4LNXYXTPjCdw9uu7PgI 3165
tests/test_gregions.py sha256=5prAAHfCQOzP3eLyxyzJ1-t8CUIbEaniXgRtBYrYWUI 7829
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tests/test_gsequence.py sha256=Voa1FFIZFqAvssZdRRzpFU9eywNWqyX-Xf1o3Sf8CnQ 1453
tests/test_gsequences.py sha256=UVD0hieF70cUZIEe6PQ5yMC-gWEjCQqSNHi-NfTLmO0 2290
genomkit-0.2.8.dist-info/LICENSE sha256=eW4kcKb8YSiyDz_jX_prp74BaxYPGEdb4WdS2iz3yco 1071
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genomkit-0.2.8.dist-info/top_level.txt sha256=-HYL46RURmK40BOe9n0xgZYzYefiIQnEbYX9NfbpKrw 15
genomkit-0.2.8.dist-info/RECORD — —

top_level.txt

genomkit
tests