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0.0.5 folding-0.0.5-py3-none-any.whl

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Project: folding
Version: 0.0.5
Filename: folding-0.0.5-py3-none-any.whl
Download: [link]
Size: 74239
MD5: 090fb40d77fa17fffe82b97beaf7793e
SHA256: 1c4705a6f43bf625546e634c05112cde0561c6b4859d030fe49c7f1dc2d60526
Uploaded: 2024-08-25 06:52:16 +0000

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METADATA · WHEEL · RECORD · entry_points.txt

METADATA

Metadata-Version: 2.1
Name: folding
Version: 0.0.5
Summary: ColabFold modified for AlphaFold2 and local installation
Author: Bevan Hunt
Home-Page: https://github.com/truemagic-coder/cyberchipped-fold
Project-Url: Repository, https://github.com/truemagic-coder/cyberchipped-fold
License: MIT, but separate licenses for the trained weights
Classifier: License :: Other/Proprietary License
Classifier: Programming Language :: Python :: 3
Classifier: Programming Language :: Python :: 3.9
Classifier: Programming Language :: Python :: 3.10
Classifier: Programming Language :: Python :: 3.11
Classifier: Topic :: Scientific/Engineering :: Artificial Intelligence
Classifier: Topic :: Scientific/Engineering :: Bio-Informatics
Requires-Python: >=3.9,<3.12
Requires-Dist: absl-py (<2.0.0,>=1.0.0)
Requires-Dist: alphafold-colabfold (==v2.3.6); extra == "alphafold" or extra == "alphafold-minus-jax"
Requires-Dist: appdirs (<2.0.0,>=1.4.4)
Requires-Dist: biopython (<1.83)
Requires-Dist: dm-haiku (<0.0.13,>=0.0.12)
Requires-Dist: importlib-metadata (<5.0.0,>=4.8.2)
Requires-Dist: jax (<0.5.0,>=0.4.20); extra == "alphafold"
Requires-Dist: matplotlib (<4.0.0,>=3.2.2)
Requires-Dist: numpy (<2.0.0,>=1.22.0)
Requires-Dist: pandas (<2.0.0,>=1.3.4)
Requires-Dist: py3Dmol (<3.0.0,>=2.0.1)
Requires-Dist: requests (<3.0.0,>=2.32.3)
Requires-Dist: tensorflow-cpu (<3.0.0,>=2.12.1); sys_platform != "darwin"
Requires-Dist: tensorflow-macos (<2.14.0); sys_platform == "darwin"
Requires-Dist: torch
Requires-Dist: tqdm (<5.0.0,>=4.62.2)
Provides-Extra: alphafold
Provides-Extra: alphafold-minus-jax
Description-Content-Type: text/markdown
[Description omitted; length: 1645 characters]

WHEEL

Wheel-Version: 1.0
Generator: poetry-core 1.9.0
Root-Is-Purelib: true
Tag: py3-none-any

RECORD

Path Digest Size
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folding/alphafold/__init__.py sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU 0
folding/alphafold/models.py sha256=h2pGHV3T1qPM4PAwl60QfZzYc_yvG4nqQim3pqZ8KvE 7956
folding/alphafold/msa.py sha256=2lqSpEdjfE9hU9VaVYwBBx_8E0Q_2UXY3gZsQX2bgDE 1364
folding/batch.py sha256=Bn8hJhCdc2QQaEsmWK-qGtlyMf6y6xwPx_GLKN9ax5k 85310
folding/citations.py sha256=xOkmf0CxMI8CQa_KFjHW-DzWmDFvaR_Rd0DPbFV99Vo 7301
folding/colabfold.py sha256=YJF7H_zSQsYX4T8ohms6YKOp3RZU7y2A1QjE6RU8C_c 28656
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folding/core/msa.py sha256=Y9VGDR_SMcpy1J1WfpTLCtx5o_vHbeSAXLjlFdtIvks 8215
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folding/data/__init__.py sha256=UL6WBv4BtKrx59yr5X2Ddt-r0t_KHfgPjo9dZ5zZ3sc 82
folding/data/templates.py sha256=dWgUT8ulMq1-fDGMcz4oyVUi1zbgSUkbLmU6XJt86p4 1477
folding/download.py sha256=s5wS1DTFoNPdrx35c111McaxM0XT_wNboXFg_hYKq7s 5308
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folding/mmseqs/__init__.py sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU 0
folding/mmseqs/merge_and_split_msas.py sha256=MXZHC-fsbP6oGWVUE1hh2BUNOk23q6_QGsFRXu8cC5U 1933
folding/mmseqs/search.py sha256=9KZwfFP8lev-yZk7qnBWi3Tc9-uHO3URAnUOLDZewCc 21813
folding/mmseqs/split_msas.py sha256=6qiSE_sEYWjhSqLWlqgEgXb1HIgm10YJtdytmGg7ikc 1862
folding/models/__init__.py sha256=UL6WBv4BtKrx59yr5X2Ddt-r0t_KHfgPjo9dZ5zZ3sc 82
folding/models/model_runner.py sha256=OaMYNeIZbVjbH0o6L3ag2v7wSMLZE3O9LjMG96rsebQ 1486
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folding/utils/__init__.py sha256=1nMhCqSg9xVSBm_InOYFwiiPqRIW46HrYtcUDV80Zzw 163
folding/utils/common.py sha256=q9bnCH6rsgNJdMHNdtA_BikexnuUADGMv5KdxhKcUOM 9336
folding/utils/file_management.py sha256=8BuiJvZs4aImmqjKIRwwsuCPPPqnjU9kQ29L_ZpehqE 540
folding/visualization/__init__.py sha256=UL6WBv4BtKrx59yr5X2Ddt-r0t_KHfgPjo9dZ5zZ3sc 82
folding/visualization/plots.py sha256=U8g3ODCc8Gl6ylhw3MnVhEGrZGxqPw7BD8T043gDArI 2016
folding-0.0.5.dist-info/LICENSE sha256=ZR38vc46XDimz9ollXosAIolEbQ-JezZhzx1x6oIhdA 1096
folding-0.0.5.dist-info/METADATA sha256=Qkn5IEmoChi15lXG845kzjmHOW8nmpJLQUumhdANN-Q 3274
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folding-0.0.5.dist-info/entry_points.txt sha256=udBSNRpZjyyQ1gPeKJMjLsw7xsIuqhBZuhomddtGJTg 177
folding-0.0.5.dist-info/RECORD — —

entry_points.txt

[console_scripts]
folding-batch = folding.batch:main
folding-relax = folding.relax:main
folding-search = folding.mmseqs.search:main
folding-split_msas = folding.mmseqs.split_msas:main