Path |
Digest |
Size |
FishTaco-1.1.6.data/scripts/run_fishtaco.py |
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FishTaco-1.1.6.data/scripts/test_fishtaco.py |
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fishtaco/__init__.py |
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fishtaco/compute_contribution_to_DA.py |
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fishtaco/compute_differential_abundance.py |
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9873 |
fishtaco/compute_pathway_abundance.py |
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fishtaco/compute_shapley_value_from_subsets.py |
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23272 |
fishtaco/learn_non_neg_elastic_net_with_prior.py |
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fishtaco/data/KOvsMODULE_BACTERIAL_KEGG_2013_07_15.tab |
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fishtaco/data/KOvsPATHWAY_BACTERIAL_KEGG_2013_07_15.tab |
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2815060 |
fishtaco/examples/KO_vs_SAMPLE_MUSiCC.tab |
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fishtaco/examples/METAPHLAN_taxa_vs_KO_only_K00001.tab |
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fishtaco/examples/METAPHLAN_taxa_vs_KO_only_K00001_K00054.tab |
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fishtaco/examples/METAPHLAN_taxa_vs_SAMPLE_for_K00001.tab |
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fishtaco/examples/PATHWAY_vs_SAMPLE_MUSiCC.tab |
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fishtaco/examples/SAMPLE_vs_CLASS.tab |
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fishtaco/examples/WGS_KO_vs_SAMPLE_MUSiCC_only_K00001.tab |
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fishtaco/examples/WGS_KO_vs_SAMPLE_MUSiCC_only_K00001_K00054.tab |
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fishtaco/examples/output/fishtaco_out_FDR_correction_STAT_taxa_contributions_SCORE_wilcoxon_ASSESSMENT_single_taxa.tab |
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fishtaco/examples/output/fishtaco_out_de_novo_inf_STAT_DA_function_SCORE_wilcoxon_ASSESSMENT_permuted_shapley_orderings.tab |
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fishtaco/examples/output/fishtaco_out_de_novo_inf_STAT_predicted_function_abundance_SCORE_wilcoxon_ASSESSMENT_single_taxa.tab |
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