Wheelodex » Projects » FinaleToolkit

FinaleToolkit

View on PyPI — Reverse Dependencies (1)

0.10.7 FinaleToolkit-0.10.7-py3-none-any.whl

Wheel Details

Project: FinaleToolkit
Version: 0.10.7
Filename: FinaleToolkit-0.10.7-py3-none-any.whl
Download: [link]
Size: 85724
MD5: c113148bd581928598ff171d104d1906
SHA256: 9d8b18f041ec7f85125c2715ca0bb673007991f3a972cfcf5ca9bcc1c6451b5b
Uploaded: 2025-02-02 23:11:45 +0000

dist-info

METADATA · WHEEL · RECORD · top_level.txt · entry_points.txt

METADATA

Metadata-Version: 2.2
Name: FinaleToolkit
Version: 0.10.7
Summary: FinaleToolkit is a package and standalone program to extract fragmentation features of cell-free DNA from paired-end sequencing data.
Author-Email: James Li <lijw21[at]wfu.edu>, Ravi Bandaru <ravi.bandaru[at]northwestern.edu>, Yaping Liu <yaping[at]northwestern.edu>
Project-Url: Homepage, https://epifluidlab.github.io/FinaleToolkit/
Project-Url: Repository, https://github.com/epifluidlab/finaletoolkit
Project-Url: Issues, https://github.com/epifluidlab/FinaleToolkit/issues
Project-Url: Changelog, https://github.com/epifluidlab/FinaleToolkit/blob/main/CHANGELOG.md
Project-Url: Wiki, https://github.com/epifluidlab/FinaleToolkit/wiki
Project-Url: Lab Website, https://epifluidlab.github.io/
License: MIT License Copyright (c) 2025 EpiFluidLab Permission is hereby granted, free of charge, to any person obtaining a copy of this software and associated documentation files (the "Software"), to deal in the Software without restriction, including without limitation the rights to use, copy, modify, merge, publish, distribute, sublicense, and/or sell copies of the Software, and to permit persons to whom the Software is furnished to do so, subject to the following conditions: The above copyright notice and this permission notice shall be included in all copies or substantial portions of the Software. THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE SOFTWARE.
Keywords: bioinformatics,cell free DNA,computational biology,genomics,epigenomics
Classifier: Programming Language :: Python :: 3
Classifier: License :: OSI Approved :: MIT License
Classifier: Operating System :: MacOS
Classifier: Operating System :: POSIX :: Linux
Classifier: Topic :: Scientific/Engineering :: Bio-Informatics
Requires-Python: >=3.9
Requires-Dist: numpy
Requires-Dist: pysam
Requires-Dist: pybigwig
Requires-Dist: py2bit
Requires-Dist: tqdm
Requires-Dist: numba
Requires-Dist: scipy
Requires-Dist: pandas
Requires-Dist: statsmodels
Requires-Dist: loess
Requires-Dist: matplotlib
Description-Content-Type: text/markdown
License-File: LICENSE
[Description omitted; length: 3732 characters]

WHEEL

Wheel-Version: 1.0
Generator: setuptools (75.8.0)
Root-Is-Purelib: true
Tag: py3-none-any

RECORD

Path Digest Size
finaletoolkit/__init__.py sha256=QDZ8sBebdmejMqNQ3nuADHZx4Q-qLK9XpiIDDLmul1g 469
finaletoolkit/version.py sha256=70Sll0nuJBTHYOYYf0COkk4zSgcFB21KteUQVnr77Lo 85
finaletoolkit/__pycache__/__init__.cpython-313.pyc sha256=1IV17MLyjXd6gLYdxd5PlGQigkjunruFqUUUQJtuXZo 793
finaletoolkit/__pycache__/version.cpython-313.pyc sha256=4RW2GZ5GJsIyS-1E-sWm9yEnBc-uyes4fizcVZggulA 274
finaletoolkit/cli/__init__.py sha256=aGMzbXH2J8leMfrPTB_QQv3D9GDUsZQjdX6dM8S2mXM 55
finaletoolkit/cli/main_cli.py sha256=ujJrUxUlVjgiTfNOiFQs31Bkk1b2NGDfJ4AvPVF8seU 35135
finaletoolkit/frag/__init__.py sha256=oGGXvuXDaCgHiFWtZVl4GKAXcusJ6EIgpoSs_mjui60 597
finaletoolkit/frag/_adjust_wps.py sha256=POjiqSAjYSWGEvQcN3iBk0bPFuPLOiVtpZXTTbexdnA 10627
finaletoolkit/frag/_cleavage_profile.py sha256=4jjwxLJ006MqkXANxuATCgp7t1mi9qj6BSxUG-O7jq8 15669
finaletoolkit/frag/_coverage.py sha256=l9QDY0hq0VBY5d4Aw7wf_I6cToGnHETUd__lNVO9aX8 10579
finaletoolkit/frag/_delfi.py sha256=h2c9YbzXLBvfYf_lLQ9t5y9FT0l_CB02VRwbbSp4u80 14492
finaletoolkit/frag/_delfi_gc_correct.py sha256=pC6anKwuPgiLVToGDfevZCiUJjq9i4ymkmfEqWErITk 3963
finaletoolkit/frag/_delfi_merge_bins.py sha256=jvNArIiz0i7Mk_ILA2FUYwWhGe6eU0axkmkz-pgmyRY 3448
finaletoolkit/frag/_end_motifs.py sha256=QHRSWhyjB6Gsj4jXDYiCgLpZEylJDIpYVTqy7BSVAQU 34779
finaletoolkit/frag/_frag_length.py sha256=xAlADnvpfF38a5xNCWtoQDVJigL8j75_vTdWvWfVJKs 15527
finaletoolkit/frag/_multi_wps.py sha256=Mk5uwbe1M7RVXyhWiqkT0eyuyN5RIFy0c90cIjcRGk8 11142
finaletoolkit/frag/_wps.py sha256=jqdLy9WtYzH9A5iY9Rf5bPc0CEE3gXWuUL-e--tFz4w 8094
finaletoolkit/frag/data/end_motif_f_profiles.tsv sha256=mHDwVxZlHL_ZPd4XaDXbzjFpUKgdZR9mjkBt79VX52k 12138
finaletoolkit/genome/__init__.py sha256=TdOb25XFsR40n1WGsW_GFzUjkIIuvCkTjf6QFRhdopM 122
finaletoolkit/genome/gaps.py sha256=-F1k3ygRRCfEng9yzf8lc_UUdoyYAsz-6NdPE6jsctE 15581
finaletoolkit/genome/data/hg19.gap.txt.gz sha256=5Rp9e-9ZU_dC2qXTQEQiq3BTFJKgpzhRfeu9C3aO0Ow 7423
finaletoolkit/genome/data/hg38.gap.txt.gz sha256=uwmpJxnqpQBvcnf5dYLIZK13LDqcm1MsEamHHM3gr2c 12586
finaletoolkit/utils/__init__.py sha256=mAPFHrGbVl9anG8jDYes3HiequvXy6Q5jcKKMMJLwbo 143
finaletoolkit/utils/_agg_bw.py sha256=dhJVv_-utr_QnWIm-U5xvI2LtpzhlRsHIUPAK-sc3gI 5210
finaletoolkit/utils/_deprecation.py sha256=-RRleoojlS1mSt3ob2jXd2PyBA_LOGn4R4GRv83bxbM 1359
finaletoolkit/utils/_filter_file.py sha256=fPwvhCSrbvz88bq2HeQjj3E64aO1G_aJ37B5tU1Oqvk 10087
finaletoolkit/utils/typing.py sha256=L968-l-1h8rkLmtZOYPZWPWDdcFhKXKJpm8PyLyEOQQ 322
finaletoolkit/utils/utils.py sha256=azXxnBDbf8d9S1kLdaDnWZMdnx-BSIyjUTlYQvo2yYE 22387
FinaleToolkit-0.10.7.dist-info/LICENSE sha256=53udVn-3PFwn8g6NoP0X75ZEEiQBV0tLhjXAur0Vyao 1068
FinaleToolkit-0.10.7.dist-info/METADATA sha256=6qvzJDJdPoyMy0fbJOgqGYtwjwhoMfystedB0rA4ffU 6399
FinaleToolkit-0.10.7.dist-info/WHEEL sha256=In9FTNxeP60KnTkGw7wk6mJPYd_dQSjEZmXdBdMCI-8 91
FinaleToolkit-0.10.7.dist-info/entry_points.txt sha256=WXZXqHtwSmkPW7L1NqIePrzZWmgDfbbwjboaqxgmS2U 70
FinaleToolkit-0.10.7.dist-info/top_level.txt sha256=dRcwtpolLMiPCTzFBIkEOuG9fy2J7ueatj23sQ3YmdY 14
FinaleToolkit-0.10.7.dist-info/RECORD — —

top_level.txt

finaletoolkit

entry_points.txt

[console_scripts]
finaletoolkit = finaletoolkit.cli.main_cli:main_cli