ficture

View on PyPIReverse Dependencies (0)

0.0.4.0 ficture-0.0.4.0-py3-none-any.whl

Wheel Details

Project: ficture
Version: 0.0.4.0
Filename: ficture-0.0.4.0-py3-none-any.whl
Download: [link]
Size: 112307
MD5: eafe69fc43c68ae997709f8e532f3d53
SHA256: 32908ae8d38aa2e775d13ba983381465ec916f884304ec485e13ca34b6e0d639
Uploaded: 2024-12-03 10:29:42 +0000

dist-info

METADATA

Metadata-Version: 2.1
Name: ficture
Version: 0.0.4.0
Summary: Segmentation free factor analysis for sub-micron resolution spatial transcriptomics
Author-Email: Yichen Si <ycsi[at]umich.edu>
Project-Url: Homepage, https://seqscope.github.io/ficture/
Project-Url: Bug Tracker, https://github.com/seqscope/ficture/issues
License: CC BY-NC 4.0
Requires-Python: >=3.9
Requires-Dist: numpy
Requires-Dist: pandas
Requires-Dist: scipy
Requires-Dist: scikit-learn
Requires-Dist: joblib
Requires-Dist: matplotlib
Requires-Dist: Pillow
Requires-Dist: Jinja2
Requires-Dist: opencv-python
Requires-Dist: shapely
Requires-Dist: geojson
Requires-Dist: geopandas
Requires-Dist: ete3
Requires-Dist: PyQt5
Description-Content-Type: text/markdown
License-File: LICENSE
[Description omitted; length: 491 characters]

WHEEL

Wheel-Version: 1.0
Generator: setuptools (75.6.0)
Root-Is-Purelib: true
Tag: py3-none-any

RECORD

Path Digest Size
ficture/__init__.py sha256=Jk8ztBSymzhrEeSVCvR94IG3NrUp9_7Wy1TL9TrIOBI 263
ficture/cli.py sha256=w8hHIGSZAsdQOXcKlxLINmlV3s9gv8DtPHvdDtOzZKc 1723
ficture/loaders/__init__.py sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU 0
ficture/loaders/data_loader.py sha256=a-SSwamNv_nxd5nVHPpvbbaP6U7PInUGS1qT1WRGhnw 10715
ficture/loaders/pixel_factor_loader.py sha256=v7ZpZjPnPenLR-8Eci1p4XhlNYG_suE2KjM1Pvm-uqA 4103
ficture/loaders/pixel_loader.py sha256=4yORErSynhU_NnrsAS_0SyAkS0zz_IEcDlamBgrLXuA 12796
ficture/loaders/pixel_to_unit_loader.py sha256=-JZ5zOgbhCR7sW2JFzs3ulHpz--jCMW5L5LhHW4vTLk 10013
ficture/loaders/unit_loader.py sha256=rYB4rTsJfkON8Zzo82M2IimKN52eqBH4jLcnA2CZsu8 7915
ficture/models/__init__.py sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU 0
ficture/models/lda_minibatch.py sha256=mdsVau4OiNmXgl0na7FU9ba6M7SlV2SBGTlq671kh3U 2442
ficture/models/online_lda.py sha256=2YgXj6Kc3tMvmb3FTmdZ27lvjvUYP6jgZo4T8yJvXiE 28506
ficture/models/online_slda.py sha256=zPFd6-9qhznIAZlyhy4LfsMyUPyhdL5VMZx936pYUc8 10460
ficture/models/slda_minibatch.py sha256=5WWCvtP0p0al3cURBaebNMXMKvL4j5tsVyLaN5T9qOs 2350
ficture/scripts/__init__.py sha256=43vwq-iSjLHIQXIkCHs7l6c1oNHT9kwqKoxA9O9K_3o 212
ficture/scripts/choose_color.py sha256=rG6fKOT4Rq9g3sAzbkVr1lvxcEZdP1SKLW6pnRaYw8s 8588
ficture/scripts/de_bulk.py sha256=SPvfOri1LQbqQP3TbT-mzoBibBESftRrjNxpr74QZxY 5785
ficture/scripts/factor_report.py sha256=SVmgjDtFzoCK242Po3KkWI_mfaQ08lgOB7FbzKPjXAk 10343
ficture/scripts/factor_report.template.html sha256=ygZJhgx-ecHWMWEp-p1pCXiatQCfjdbFfvDmzUHVFFE 2442
ficture/scripts/filter_boundary.py sha256=OiGn7PlIfykPpJqY2kSTN66hskVUqwRY4pw3ENX4qss 4738
ficture/scripts/filter_density.py sha256=M2X8n-aV6ctDA-ykxLnetDb9jAr10vqFkpsrKAjzq-A 7726
ficture/scripts/filter_poly.py sha256=_gXCVF8StfPGM3CobXf9Cns_2pBUbyEhXnGEJvMM7EU 10567
ficture/scripts/init_from_pseudobulk.py sha256=y5fXLhxgGN2Mc4Gwnz4VqZVzL_TERUAjk7EmVhuOKDQ 7452
ficture/scripts/init_model_selection.py sha256=Yf72o7hbNEupKwsrhpD8nWltorI8mJRRARYcxrO2NpI 12247
ficture/scripts/lda_univ.py sha256=3u09h1e65atlkN4Fws4QfyNXkY1JqNnq0NxkfpC9AR0 12193
ficture/scripts/make_dge_univ.py sha256=gshZyMzBw71ShvsCX3Bj0aE3oukAY-9IzdrQ4WA_IUw 9033
ficture/scripts/make_sge_by_hexagon.py sha256=Pep6uzbmgk5bFbQtpE7p2BYkxI68szXyRrWqtcgzscc 10502
ficture/scripts/make_spatial_minibatch.py sha256=TWKArLBR1T_UU4wqSplx7zPKAKYSHrcHhKwB8cOP0sg 7444
ficture/scripts/plot_base.py sha256=8ZUE8Ogs081oc_3obN1zg9tMjKOx1Yamx5XJrC4Y784 11623
ficture/scripts/plot_hexagon.py sha256=B6irnboY8qmcuJA5svzcU_E9tU39Dzbx04QhSH-vmHE 11866
ficture/scripts/plot_pixel_full.py sha256=qwaZE_Vn703Z9D3PhDweZkNDosKrkrULvIB_1fcMLsw 7245
ficture/scripts/plot_pixel_multi.py sha256=6gZr-8aslS8NcpqwXbaJe-EWavyeZYp1v4jw8bjLp1s 6782
ficture/scripts/plot_pixel_single.py sha256=caUwKD9W4L6P6-pZge2qK-60F8Gp1-pK23hmDmt8OtA 4698
ficture/scripts/run_together.py sha256=sEreF6DLFetUVpQCXzwSzQQmT21KPTd6UD4p-6GWrpM 21621
ficture/scripts/slda_decode.py sha256=AuXgzR-F9owWdTXZIHE_nsZikp_nlKEAj7JAqxMNEeY 9334
ficture/scripts/transform_univ.py sha256=VNrlOkbSkbfHfEuBcX93SnOqWEhAF-Iy6UzygZ5gPKs 8931
ficture/utils/__init__.py sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU 0
ficture/utils/filter_fn.py sha256=R2dcQnQi5FDCxDchE7aAijbv121g37t35Gw7b_UL_mc 4501
ficture/utils/hexagon_fn.py sha256=xp-ONjMsuxl82-8WgFEBHx4HcmjVEGSNilIlMevTOfM 2123
ficture/utils/image_fn.py sha256=YK2O7ESBOwxSdAL5TRcESSSdRz_PV_lshMX8HzDcJQ0 11956
ficture/utils/layout_fn.py sha256=kJ9EtSH2mnHott1c8hP_CGFpiRD324QGfOxoUOZD2c8 1447
ficture/utils/mds_color_circle.py sha256=V7YwleOqHly2NYbqJrFQ4M3qkDJtl_NvQ2ihEwoxdP8 3767
ficture/utils/minimake.py sha256=EoRwiErdoJb0ggdUMn_KBQsbxoliOTo84Q7XtjQO1zw 2457
ficture/utils/utilt.py sha256=r4arV_Bd3EZ3bi98x682_QGqQF2ktFiOXCcD9_rC8II 15007
ficture/utils/visualize_factors.py sha256=8-XVG3wtlx110VGJWVdB-DqEWeJxfJ-lULift7KJ0yg 5885
ficture-0.0.4.0.dist-info/LICENSE sha256=QQA9SnR0nAIg4z3UFQQhZLWhCT7UAfNidyNPdy0i09A 19347
ficture-0.0.4.0.dist-info/METADATA sha256=VsyN01hpl_Ksd4NdJ6DRQhOnsy96cdslijDf6x0g1J0 1239
ficture-0.0.4.0.dist-info/WHEEL sha256=PZUExdf71Ui_so67QXpySuHtCi3-J3wvF4ORK6k_S8U 91
ficture-0.0.4.0.dist-info/entry_points.txt sha256=_flgBXijBuOH4ROb-owUk4k-Eoz9XECvGrlY0EqCTII 45
ficture-0.0.4.0.dist-info/top_level.txt sha256=CWqBQWRbtJqY663WLaE541rv973I6gQScEK79GEz0do 8
ficture-0.0.4.0.dist-info/RECORD

top_level.txt

ficture

entry_points.txt

ficture = ficture.cli:main