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Espalier

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0.1.2 Espalier-0.1.2-py3-none-any.whl

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Project: Espalier
Version: 0.1.2
Filename: Espalier-0.1.2-py3-none-any.whl
Download: [link]
Size: 175346
MD5: d63089eb779c34e7c40288cab612d4b4
SHA256: 4cdac903f4fa3af217f785c7673814ad1949a6ed62f321dd4c8758232130a2d5
Uploaded: 2022-01-17 17:19:51 +0000

dist-info

METADATA · WHEEL · RECORD · top_level.txt · entry_points.txt

METADATA

Metadata-Version: 2.1
Name: Espalier
Version: 0.1.2
Summary: Espalier is a Python package for working with discordant phylogenetic trees using maximum agreement forests
Author: David Rasmussen
Author-Email: drasmus[at]ncsu.edu
Home-Page: https://github.com/davidrasm/Espalier
License: Apache License 2.0
Requires-Dist: numpy
Requires-Dist: dendropy
Requires-Dist: pandas
Requires-Dist: tskit
Requires-Dist: biopython
Requires-Dist: scipy
Requires-Dist: click
Description-Content-Type: text/markdown
[Description omitted; length: 1319 characters]

WHEEL

Wheel-Version: 1.0
Generator: bdist_wheel (0.36.2)
Root-Is-Purelib: true
Tag: py3-none-any

RECORD

Path Digest Size
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Espalier/ARGSeqSimulator.py sha256=Gj0MS7p9AtFT8Hvr-tfLLy92dhYNVFPMVVBzqI1iUbg 4906
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Espalier/ARGweaver.py sha256=YQyUtKoI0vT6hoVOw066V4W00v_ciWVQHbngDk31_NM 4718
Espalier/Dendro2TSConverter.py sha256=8KSzN58Pjtj09SpizC4GRKEvOl_LdOpaHkaIVV6pqbY 34472
Espalier/IQTree.py sha256=0bL8N-PcA9SOEAV5gD6A-I1z2QMsVZ1ulO65UAJQgLE 2871
Espalier/MAF.py sha256=hK3xheR2qo2GABU3D-AhPCW_UFcu97SUgSHG072tDIY 17028
Espalier/PlotARGPerformance.py sha256=9bvk35-ABhMwIzZblYkAJXpkEZSFnxpJfMyNJQYgF7Q 3481
Espalier/PlotDistRegression.py sha256=xQZINNSRLmtw1hm3wFIhOWoJXb1TTR5W9G1Sgju9-qc 1479
Espalier/PlotEstimateRegression.py sha256=Ekmg-OHzSoNAomZgeRsqWxi3PIzYNcPoxiexbA_cHZk 3915
Espalier/PlotMAFPerformance.py sha256=G0FPn2J-TS4QahxYsJ1wCpdSCcHTro3LgfMmMsNlcPA 3676
Espalier/PlotTanglegrams.py sha256=a_f2fFFsusmQYfwcq7LohNZugM5cH2nO96aApoZZZRc 11361
Espalier/RAxML.py sha256=kPp8iXdeGlz9rl8qCJXYSG8Hqgz-fV7eoDusHFFYiwI 12953
Espalier/Reconciler.py sha256=0EZ-nBJPWPi-Ls3dqwb7oUQdFt5KzqEKV0Gr9_n8bnc 24064
Espalier/SCARLikelihood.py sha256=mx0GA01W1xQi18kHtKaDL8-BhxzUG13Ct-dt9hS_0ms 19480
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Espalier/TreeDisentagler.py sha256=7muKCEW_3dtUWngUEPtv4uuYonzSyE41pZwLM4yFkdc 8475
Espalier/TreeOps.py sha256=PFSn9NXIQjvV-rcSIFvJl9OUbVtpyIiudUzydlAclMo 6756
Espalier/TreeRandomizer.py sha256=ZxDoiBlx3phBsVu9jMjaLNnziJgeT3xSOx9s_d-yK70 5829
Espalier/TreeReconciler.py sha256=XPVmgHG1vzFN1xWGtFpg9YC5M20c531ElrOaeJt9YKY 70682
Espalier/Utils.py sha256=CE52v-zoYvYHA58s66iyxS1lvD9EDh_lcfZI4lzuGDI 5763
Espalier/Viterbi.py sha256=EqrMY9GI7FqfHRClHINkyqGK140ANaJx4Sizv9Qd11s 7047
Espalier/__init__.py sha256=mt2Un9Y9qIO_slp790LtaN5FmGOt0HVaQVLpM43MhEM 659
Espalier/balticmod.py sha256=KwQptprpm0aC-T1T1xeLpKHceU-E59ToRtMAxvxjLuE 53462
Espalier/concat_alignments.py sha256=AlBIF3-mUwfrGQ9v6rkCWZcoUrjbN8S2GOe9xlauJ0Q 778
Espalier/defunct_MAF.py sha256=i0Of43qqDlzZ5yuvW0RBu0D5EAI3AFLXra81Lxymf7U 11641
Espalier/espalier.py sha256=TexF9MgVTys5yUo1rl2bIw-wxu64tKugYjqW2tvpwd8 6454
Espalier/poty_ARG.py sha256=ShxYezEb8h-SIK4_uwByFxrw_8b4H29wPl_fUW4LqRc 4985
Espalier/test_ARG_sampler.py sha256=n3l2nzo4RfLKffUj0Dxv5wH2HGxLcrC_UcwpuvNEQ5w 18787
Espalier/test_EM_estimator.py sha256=02OJkbW-IBcUEBtC9gyd_gAZ2XvKL-JHgYkihrk0eQw 12237
Espalier/sim/ARGSimulator.py sha256=KhzTiH0LQ0IdyMV66jypScMOBcX8zFXU_PjnScKQXjY 4968
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Espalier/sim/__init__.py sha256=9cHopppvbu6h22Nh148yaj71H1uT4OLeAkE57irX5bU 61
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Espalier/tests/profile_MAFs.py sha256=7dIIyQFM23JDvgLkyaCnPCJ-ddGdw8fRx3Fk0xAC3RU 1928
Espalier/tests/test_ARG_reconstruction.py sha256=cp5TX4dxSKHahI4qS2F7I4XkNEYu2rG5tSUIxd46iR0 18912
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Espalier/tests/test_core.py sha256=7jdD6dMvWQRABfJWILM25NGFK05CMqCbpHQH4zuFFZ4 2124
Espalier/tests/test_deep_rooting.py sha256=IpoR9Hm8lc8cr5FJEJDBCp6AKWDePZRRqOY7zdRC7Hk 1197
Espalier/tests/test_dendro2ts_conversion.py sha256=lBOsk32AylF4vzaOvBtuY9Howx4O1ImICHlDT-2PDXw 1779
Espalier/tests/test_maf.py sha256=Da5V15-zqHNfuNJhoC14R1q7FkOLXpAT_1RkgdGnRu4 959
Espalier/tests/test_maf_randomSPR.py sha256=AL1cSN3ln6LrDEPMIDxwwTAWSrljK0Qt30AsNOG-Ju0 3949
Espalier/tests/test_msprime_sims.py sha256=cSpQ8PSb6WfN2tf7fqF9aHFA3Aj_8Ej7gtVSVQuSoiE 2677
Espalier/tests/test_recomb_placement.py sha256=fbavl5UoF--LCmoshRrU13rCCnX6E3y-5CwZ3-52Fwg 13073
Espalier/tests/test_recomb_placement_path.py sha256=ExzK08xf1RoVeMr1mBBT2XuozGxOZN_tkR2l4-2NqF4 15196
Espalier/tests/test_reconciled_linked_heights.py sha256=IIx-uuy3pSOV_N98RgxcPPcYEP7bvZjV_YVbcta191M 1488
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Espalier/viz/PlotTanglegrams.py sha256=3qXwppjeIkkLmtG3xlaOWtzrS3Fl7VGnPIuPF3aCnM4 20756
Espalier/viz/TreePlotter.py sha256=EGNAJ9h4-SGj-l-zImeLa5Rqk9r6ru7hYkBl4yN1IwU 1338
Espalier/viz/__init__.py sha256=9cHopppvbu6h22Nh148yaj71H1uT4OLeAkE57irX5bU 61
Espalier/viz/balticmod.py sha256=Ns2LFZNPnDVznU4HTlHorms47PadOR5Erqj1KFEiV3g 53724
Espalier-0.1.2.dist-info/METADATA sha256=DQqsNWXKizmB471tJxdq61jQFvEm11sMOTILC_FT-aM 1834
Espalier-0.1.2.dist-info/WHEEL sha256=OqRkF0eY5GHssMorFjlbTIq072vpHpF60fIQA6lS9xA 92
Espalier-0.1.2.dist-info/entry_points.txt sha256=_I0BG366BW5yqZVFNWGjJM2gznCOCpgdLSzgb0z_s54 53
Espalier-0.1.2.dist-info/top_level.txt sha256=Pohwe6iu4NtSBvip8Ory4grhuqF7Ht8BHx5-_lr3qsM 9
Espalier-0.1.2.dist-info/RECORD — —

top_level.txt

Espalier

entry_points.txt

[console_scripts]
espalier = Espalier.espalier:main