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epiout

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0.0.1 epiout-0.0.1-py3-none-any.whl

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Project: epiout
Version: 0.0.1
Filename: epiout-0.0.1-py3-none-any.whl
Download: [link]
Size: 33566
MD5: 82eb90409ed7ab55ef12f9fe232aa375
SHA256: 67057d0ac63c570e6de10b5fc98692354672534052b2625ebbf991cee585f99c
Uploaded: 2023-09-06 21:09:27 +0000

dist-info

METADATA · WHEEL · RECORD · top_level.txt · entry_points.txt

METADATA

Metadata-Version: 2.1
Name: epiout
Version: 0.0.1
Summary: EpiOut: outlier detection for DNA accesibility data.
Author: M. Hasan Çelik
Author-Email: muhammedhasancelik[at]gmail.com
Home-Page: https://github.com/muhammedhasan/epiout
License: MIT license
Keywords: genomics,ATAC-seq
Classifier: Natural Language :: English
Classifier: Programming Language :: Python :: 3.7
Classifier: Programming Language :: Python :: 3.8
Classifier: Programming Language :: Python :: 3.9
Requires-Dist: setuptools
Requires-Dist: tqdm
Requires-Dist: pyyaml
Requires-Dist: click
Requires-Dist: numpy (<=1.23)
Requires-Dist: pooch
Requires-Dist: anndata
Requires-Dist: pandas
Requires-Dist: pyarrow
Requires-Dist: pyranges
Requires-Dist: scipy
Requires-Dist: matplotlib
Requires-Dist: seaborn
Requires-Dist: pysam
Requires-Dist: joblib
Requires-Dist: scikit-learn
Requires-Dist: pyBigWig
Requires-Dist: statsmodels
Requires-Dist: tensorflow
Requires-Dist: tensorflow-probability
Description-Content-Type: text/markdown
[Description omitted; length: 5875 characters]

WHEEL

Wheel-Version: 1.0
Generator: bdist_wheel (0.41.2)
Root-Is-Purelib: true
Tag: py3-none-any

RECORD

Path Digest Size
epiout/__init__.py sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU 0
epiout/annotate.py sha256=Dk3msynMDHDYj8SkrsxcjSDhHN1euGeSpuhdj_K2tpc 12390
epiout/annotation_config.py sha256=Dvgviy-3kmZjK0_e_E0vdiM2j20IyDV-mNCN7aCr81Q 5936
epiout/autoencoder.py sha256=22O4H3BZBm_G1SkGZpG4qkjrsNy-K5C9JyU5ec-RbUs 6270
epiout/dataclasses.py sha256=VZv_h8IWeM7ozM16u4V-skbghQ5qSlLnuss8zbFyRFc 1191
epiout/dataset.py sha256=hmxWb-jZAO5X_RKW1-cJwve9WfM7LoXPZd88MUV3JEg 6226
epiout/epiout.py sha256=NscpWIAb5fA6Fe7rM39dP_Fb7rfN3qjAbhCWHl8i0bA 3271
epiout/gene.py sha256=KIYXUCSvVDBA4n2G0yw4QgGqi14Mu-QZOYXn8eKfJ68 6014
epiout/hic.py sha256=P0ONcPnXMrC1TDoYV6oy7vonWSkR2q3A2R_RzemcGMU 4973
epiout/inject.py sha256=CL2sV1TeiAm3ra9ATf08uWNLOr5_p24jaByoZO2Byfw 1564
epiout/main.py sha256=cLdR87877uojjTU2SaAI5TWuhnNyZjE1y4CmpfOe1Ck 7586
epiout/negative_binomial.py sha256=f69GKma6uAPc0T3pFUZUJ3Yn7NkI22IJLS9J8XgC7LQ 6113
epiout/optimizer.py sha256=vdgf9_g40W-RrWzDQPSLW6aDGtOvd4i0CNWRqdZIfy4 5897
epiout/plot.py sha256=lS6D0QEO1lslLhgkFA9vB5aK7XuE_I1mOI1tg_fgL2k 15266
epiout/result.py sha256=EUZAc-R-teD5J58D2QApi5EK_q20uZhvsU1y333ZLag 9013
epiout/sflognorm.py sha256=mNPjmmQUB1FrddaWkY2b_zGOLERJTXw6xcBqvUCFfAk 2281
epiout/utils/__init__.py sha256=xPP7VPzvjiwu7iXiLAw16Z1C_nPOtv-8LNcfBoe5e4w 578
epiout/utils/common.py sha256=EsgVr7SCUxk1u7PxMO04gSWd2QSXcXXT1GSs3cGr7Ls 313
epiout/utils/genomic_features.py sha256=ncLBfGX2oqxB-dyEnjhvYOQ-QCkGmjKuDtTTuFk_UDo 802
epiout/utils/io.py sha256=t87_Bo2poMdxZG3zqkNM_QvFPEv6I9P1sS9NNHlBHKo 300
epiout/utils/utils.py sha256=VCC9BVaqeLvzQKryvToXJMkfKqRkJTqLmaOLXWQCnnA 612
epiout-0.0.1.dist-info/METADATA sha256=6HeijoN1iMxeBZL5-5EkNAGXldCoUW5LvhVBV2Kj2-4 6871
epiout-0.0.1.dist-info/WHEEL sha256=yQN5g4mg4AybRjkgi-9yy4iQEFibGQmlz78Pik5Or-A 92
epiout-0.0.1.dist-info/entry_points.txt sha256=SfMsvhbFPNJd11uqUfSGqEP-3TdcpM4wf-fDkcHpNm0 218
epiout-0.0.1.dist-info/top_level.txt sha256=qhOwftSkGom_YIFhywEyaMkOs-8U9aQLje-IstungJo 7
epiout-0.0.1.dist-info/RECORD — —

top_level.txt

epiout

entry_points.txt

[console_scripts]
epiannot = epiout.main:cli_epiannot
epiannot_create = epiout.main:cli_epiannot_create
epiannot_list = epiout.main:cli_epiannot_list
epicount = epiout.main:cli_epicount
epiout = epiout.main:cli_epiout