Reverse Dependencies of edt

The following projects have a declared dependency on edt:

• biapy — BiaPy: Bioimage analysis pipelines in Python
• cellpose-omni — cellpose fork developed for omnipose
• cellpose-omni-acdc — cellpose fork developed for omnipose
• connectomics — Common repository for connectomics-related libraries.
• cyto-dl — Collection of representation learning models, techniques, callbacks, utils, used to create latent variable models of cell shape, morphology and intracellular organization.
• delaunay-watershed-3d — Geometrical reconstruction of cell assemblies from instance segmentations
• dexp — Light-sheet Dataset EXploration and Processing
• DiST-Net — keras implementation of DiSTNet & utilities for mother machine data analysis with keras
• DiSTNet2D — tensorflow/keras implementation of DiSTNet 2D
• dpm-tools — A collection of tools and workflows to streamline the processing and visualization of porous media images.
• epicure — Napari plugin to manually correct epithelia segmentation in movies
• evalseg — Medical Image Segmentation Evaluation
• fastmorph — Morphological image processing for 3D multi-label images.
• imops — Efficient parallelizable algorithms for multidimensional arrays to speed up your data pipelines
• instanseg-torch — Package for instanseg-torch PyPi
• kimimaro — Skeletonize densely labeled image volumes.
• localthickness — Fast local thickness in 3D and 2D.
• merge-stardist-masks — Merge Stardist Masks
• napari-label-interpolator — A napari plugin to interpolate any number of nd-labels across a single dimension.
• omnipose — cell segmentation algorithm improving on the Cellpose framework
• omnipose-acdc — cell segmentation algorithm improving on the Cellpose framework
• opencmp — OpenCMP is a computational multiphysics software package based on the finite element method.
• poremks — for analytics on nanoporous molecular structures
• porespy — A set of tools for analyzing 3D images of porous materials
• quantimpy — This package performs morphological operations and can compute the Minkowski functionals and functions
• stardist-stacked-timepoints — Stardist Stacked Timepoints
• stemia — A personal collection of (sometimes...) useful scripts and tools for cryoem/cryoet.
• torchvf — Vector fields for instance segmentation in PyTorch.
• ultrack — Large-scale multi-hypotheses cell tracking