Wheelodex » Projects » dnacauldron

dnacauldron

View on PyPI — Reverse Dependencies (1)

2.0.11 dnacauldron-2.0.11-py3-none-any.whl

Wheel Details

Project: dnacauldron
Version: 2.0.11
Filename: dnacauldron-2.0.11-py3-none-any.whl
Download: [link]
Size: 120708
MD5: 20afe97f4f58cc9c41a3df2508aaad37
SHA256: 378374d9a9a48d12d8ad4e1d5e63a6d7ea7207ebaa3435264c2cf744cce23bca
Uploaded: 2025-04-03 17:36:48 +0000

dist-info

METADATA · WHEEL · RECORD · top_level.txt · entry_points.txt

METADATA

Metadata-Version: 2.4
Name: dnacauldron
Version: 2.0.11
Summary: Cloning simulation for DNA assembly (Golden Gate, Gibson...)
Author: Zulko
Project-Url: Homepage, https://github.com/Edinburgh-Genome-Foundry/dnacauldron
Keywords: DNA,assembly,cloning,simulator,synthetic biology
Requires-Dist: Biopython
Requires-Dist: numpy
Requires-Dist: matplotlib
Requires-Dist: fuzzywuzzy
Requires-Dist: pandas
Requires-Dist: scipy
Requires-Dist: networkx
Requires-Dist: dna_features_viewer
Requires-Dist: flametree
Requires-Dist: snapgene_reader
Requires-Dist: proglog
Requires-Dist: xlwt
Requires-Dist: openpyxl
Requires-Dist: python-Levenshtein
Requires-Dist: xlrd
Requires-Dist: pdf_reports; extra == "reports"
Provides-Extra: reports
Description-Content-Type: text/x-rst
Dynamic: license-file
License-Expression: MIT
License-File: LICENCE.txt
[Description omitted; length: 1296 characters]

WHEEL

Wheel-Version: 1.0
Generator: setuptools (78.1.0)
Root-Is-Purelib: true
Tag: py3-none-any

RECORD

Path Digest Size
dnacauldron/Filter.py sha256=nGXIRVNP3wtr0UJC6ZXFmefW9dJzBAxR48bql_AP7ww 3216
dnacauldron/SequenceRepository.py sha256=X7dM7k-olCLX2BzcUJxRLeRh6OCcYUcBCS85BP5V5vc 7010
dnacauldron/__init__.py sha256=WjWpBDhoiTpimLXZpZ1Ss0yeqzibDhgrU2_RCbkCBGA 1231
dnacauldron/cli.py sha256=lYD2VxWYswJLh65hzGFhxKqx9GYouPzS8UP-4EIGZiQ 2242
dnacauldron/reports.py sha256=zy_4l3qE9YaPyX7PMRU-LL1J5f4XNdmIQt6BYa0hT08 1989
dnacauldron/tools.py sha256=eAzKW-7bCNIE77OpxqMxzenju0rVZmwaTxu0wj1CzwY 529
dnacauldron/version.py sha256=T-q0gGRSS4Se3uygy0WDtGhPp5plXECGZSjUouo_yUU 23
dnacauldron/Assembly/Assembly.py sha256=LpHcrq5kqLtUkNo57XNYp1fijFQ7EwrlJ0q9OKj7I_c 4949
dnacauldron/Assembly/AssemblyFlaw.py sha256=8NCSo6Rh6-CrcYmwtBGAri8FO1X4y-Q7HcuW7ZxnI78 1063
dnacauldron/Assembly/AssemblySimulation.py sha256=H7cutLQcTybwBx-rbp3ECzwj3DwdrACn7psWa137PsQ 4992
dnacauldron/Assembly/__init__.py sha256=tA6UuSqzgFpHiuNB6MtUgjLPrWRUVUewmPvfylYoW-c 926
dnacauldron/Assembly/AssemblyReportWriter/AssemblyPlotTranslator.py sha256=lrpOuYcyZ6aswWjUwpfdZAqpYASWAJiD3ul4Gr0hcQY 1143
dnacauldron/Assembly/AssemblyReportWriter/AssemblyReportPlotsMixin.py sha256=ms2TuYAh_v8BbbfbE3GybiVPeZYGn5sHAvDWfKF2yug 1835
dnacauldron/Assembly/AssemblyReportWriter/AssemblyReportWriter.py sha256=M_Sa3uuKlMtrjLopjhRhpX9tCS1Czp_vJUKJJ104xzY 8321
dnacauldron/Assembly/AssemblyReportWriter/__init__.py sha256=y9QvDSRNyRuCD2MBGsh4Mtu46xCpHhY3ZSjmvQIWfxY 176
dnacauldron/Assembly/AssemblyReportWriter/plot_cuts.py sha256=LnsrWD6s9KwRKsDcnhr02176uXSEYUne8V02C63ZXSE 2272
dnacauldron/Assembly/builtin_assembly_classes/BASICAssembly.py sha256=GyKhHhoVhvMcBmBKEw-txJhz64MQyf4oc3__02KULM4 6077
dnacauldron/Assembly/builtin_assembly_classes/BioBrickStandardAssembly.py sha256=E1jIZO9Ou0iqHiRXH8oPeBhjCrsS3cjEmSfM4N1UEmk 6783
dnacauldron/Assembly/builtin_assembly_classes/GibsonAssembly.py sha256=grhtZ-B4BQBplP-zVs7wxLLFNYbWRBoZEG1k6WXTPjk 7809
dnacauldron/Assembly/builtin_assembly_classes/LigaseCyclingReactionAssembly.py sha256=ox3_8ZQBqW3RwCUe7UR8lT_djsCRNFXdHtQs3s_kf1Q 8753
dnacauldron/Assembly/builtin_assembly_classes/OligoPairAnnealing.py sha256=RmSsE3TYSH5sjqxKufL50o8OtgKcrdE0kzUn9HKsWa0 3311
dnacauldron/Assembly/builtin_assembly_classes/Type2sRestrictionAssembly.py sha256=4V9SKIMqVApMMxdxrSic1Vb5PBf59fbANeF9FeuImmc 8891
dnacauldron/Assembly/builtin_assembly_classes/__init__.py sha256=lyayqULLdWZuhGtSforcCt8joSff9FiqafN0_upvdH4 522
dnacauldron/AssemblyMix/AssemblyMix.py sha256=1ge5dzWNWipQFibevSWw2R24REAaARtBHX_QCozJS44 984
dnacauldron/AssemblyMix/AssemblyMixError.py sha256=qNkedOisZrVbSw2eobDvjAV9ntb_NFhv_tQNW3uts5E 251
dnacauldron/AssemblyMix/HomologousAssemblyMix.py sha256=SpgUUIoh9ruNeS1KXWi_9tLcAz6kAhbR_z1tPpOEvj4 2349
dnacauldron/AssemblyMix/LigaseCyclingReactionMix.py sha256=9sj4PvtwvzB-jEihTlGBHD1_KhOVV7zIdgKdKurkteY 4851
dnacauldron/AssemblyMix/RestrictionLigationMix.py sha256=tgTGWq1weSSgUhrTCI_R9ZYNYKUxxxzD3Wi3vf7JzT0 3763
dnacauldron/AssemblyMix/__init__.py sha256=mDW8j6RQ-QDEoH1MUujTIgvgYKxTMf1WzA-1eCsx4h8 511
dnacauldron/AssemblyMix/StickyEndAssemblyMix/PlotsMixin.py sha256=UHZkQ-_zS6BlJQNMm6xyXCIl1erquPLiuiLMlniWxqY 5576
dnacauldron/AssemblyMix/StickyEndAssemblyMix/SlotsMixin.py sha256=SVKDKBQByNlLtFBLvu2G-cEO9HFSuBbyEg3QXj04E-0 3387
dnacauldron/AssemblyMix/StickyEndAssemblyMix/StickyEndAssemblyMix.py sha256=_YiRm1MVhGRnTJSCVRfcuPGQ5V1K6wRXSXkOGFZPZP0 2333
dnacauldron/AssemblyMix/StickyEndAssemblyMix/__init__.py sha256=WT9jyPiXwXQaxKRcR6z94cFZpczRoUohBdbhVaYiMe0 55
dnacauldron/AssemblyMix/mixins/ConnectorsMixin.py sha256=qJD_5J4szJAGr7i01-5wExBP8vI6lf23q547FnmbGhU 3519
dnacauldron/AssemblyMix/mixins/ConstructsMixin.py sha256=DHWF1sIfkoHvNKwW-OH3akCgTUJPjZfzjAjn92FLt7M 11038
dnacauldron/AssemblyMix/mixins/FragmentsMixin.py sha256=vUFdMn9dKSxYsgdfhYECSnJ5N4nlaAOdM5D4jIHtnKA 1732
dnacauldron/AssemblyMix/mixins/GraphsMixin.py sha256=nFYmLgFBy_TN2zSb1lBhRWH6mbabZSLDiGv0-0ZbhtI 3781
dnacauldron/AssemblyMix/mixins/PlotsMixin.py sha256=zBCTI_REVDyFKOF0s1rZe_h5BpSQ7-AcK76WmjoODs4 2095
dnacauldron/AssemblyMix/mixins/__init__.py sha256=7Lu7eoNkR33KNm4Nj-xnaCHLe2Ywi1dB96zYI3hMD0c 205
dnacauldron/AssemblyPlan/AssemblyPlan.py sha256=K_TZ47j3acRt1BxoNTZXaAGtZq6MkONcoUTpCiAf-WI 10143
dnacauldron/AssemblyPlan/AssemblyPlanSimulation.py sha256=d8cF-0LnDTzimcGf2oYi0gjiuPOlxWBQwE3nZaHp3qo 12584
dnacauldron/AssemblyPlan/__init__.py sha256=KBibk7KrzfL3v4_yok83YwgIGTAsiZuLHcAJbm2h5ow 169
dnacauldron/AssemblyPlan/plot_leveled_graph.py sha256=bJD27X-PkbRCqcFUF-qAIop0ZrnVwPXKeMnfmp2M75Q 4095
dnacauldron/Fragment/Fragment.py sha256=u1MsK4GoJiZF_JVDIGn7ORuEnHBlEibUFfcVkghS1O4 2161
dnacauldron/Fragment/FragmentChain.py sha256=iWhFnylqRaClwBnNLassL4MOTyfE2bTE91QrxVwSV9k 5678
dnacauldron/Fragment/__init__.py sha256=X0EeNR3HdXMKTYCwdi8NIDv2n-uuXrm9cAloD9xnLbQ 315
dnacauldron/Fragment/HomologousFragment/HomologousFragment.py sha256=-PYJlQswnxb5-9H3lAM9by8GjZDf2Stxo-gFIm8Emk0 6047
dnacauldron/Fragment/HomologousFragment/HomologyChecker.py sha256=X9hcBKvoVf8Hpz3A8cF9R5vS1Al31Tvt15jGQLzknA4 3430
dnacauldron/Fragment/HomologousFragment/__init__.py sha256=eH6IiLJdwp3rQR59s_RvPmC-yztRdxMhdJy2lAx-zyA 149
dnacauldron/Fragment/StickyEndFragment/StickyEnd.py sha256=D43Gt0_2u-Dbq0kWwNcquHkSm9ZWk7IwH4M_XlPtmWA 1722
dnacauldron/Fragment/StickyEndFragment/StickyEndFragment.py sha256=vVqtMLNFr1TwWDgKzVoOK7rDwi2EmZ4gnrrdW5trBUI 6724
dnacauldron/Fragment/StickyEndFragment/StickyEndSeq.py sha256=k74zbgtDXmfQjxoxEqLwXRj20FQor6e_3MmjJHubAdo 9751
dnacauldron/Fragment/StickyEndFragment/__init__.py sha256=FqUvpA0Hg3atZxUKD41gRk_rfr9Lf36vgEcJ18aP7v4 315
dnacauldron/biotools/__init__.py sha256=x-ZR_FtT721ukxo0aju64y38zEbhOZGl7eZ1JCPCuxE 343
dnacauldron/biotools/autoselect_enzyme.py sha256=hQTNkqY1h7dIAiIgszmqmOqAN1MfB6hHavy0Cy5-DOg 924
dnacauldron/biotools/record_operations.py sha256=V4jnq3zcshk0RZCI7_1UZHQrBG5P3q1R-5AoIAkK9XU 4516
dnacauldron/biotools/sequence_io.py sha256=s1S3oOJ1J4ihnuapgrWpdm-DZeh93dvnJjyTtBzOnfM 8602
dnacauldron/report_assets/report_style.css sha256=sqR-TBmmk-p-zX3vqD6-vbhsnxM23wTk0Ysh5-Ahs9w 303
dnacauldron/report_assets/simulation_report.pug sha256=psdNqOkXzoZ81cEqpO7nZh4xHxRG9eCp5-SZsmb_Raw 973
dnacauldron/report_assets/imgs/logo.png sha256=5dKq9lTKJI1yko9AtAOnw-f9m5o9RZDXPNXCtC3hjvo 19541
dnacauldron/utils/__init__.py sha256=X6nyo7BwUqTdJON_rDciMy_T93uz-Tg9dIy_FWqFHVs 513
dnacauldron/utils/insert_parts_on_backbones.py sha256=IR9VYyIKo-wfy-zXZ_zzsebqFncSPLIKtk_5ZYamgPA 11607
dnacauldron/utils/utils.py sha256=tI-iI5h6adIWK_1u1WPaoHY9Ei6m534D40KyyJ_K1ag 4803
dnacauldron-2.0.11.dist-info/licenses/LICENCE.txt sha256=qQcsLRQFpPp9ftBgbKeV0-x78GJcfF7pUGxcwL2mSkk 1106
examples/BASIC_assembly/BASIC_assembly.py sha256=jThUIu0p3nlQeIgW9P_DCc23mpGLz3WppUizE9H2lrw 330
examples/autoselect_connectors/autoselect_connectors.py sha256=oKEGyIgo1zI0flKLjsS0oaIhj03rxEQ0NOgAKxTS2ck 794
examples/combinatorial_golden_gate/combinatorial_golden_gate.py sha256=rvW-GSdzSJsNbGZmmk_Ie64ddQGH_DN_yh1LHFRbz-M 662
examples/combinatorial_golden_gate/random_constructs_from_combinatorial_design.py sha256=kXFaqw4JAIPuQWakFab7PHot0FIVTeCNUFTor2Fwnyk 646
examples/gibson_assembly/gibson_assembly.py sha256=5_qayvk7GeX9oBAGTd4tyn5xr1zwUBVyGOOM4Q581XE 628
examples/hierarchical_biobrick/hierarchical_biobrick.py sha256=Sw18iHt8vxyxM5xER-1Bj7ymRMSe8qz7SObYZm4kRiE 454
examples/hierarchical_golden_gate/hierarchical_golden_gate.py sha256=YIud6PwyUtGXUVCUvEfXYbqr2fw8tt7ApLQL2nx1AmM 523
examples/lcr_assembly/README.txt sha256=CjeEjNW0PA21m_EeNVATTH3idmKWkAEvOdDbGYcP8ZI 329
examples/lcr_assembly/example_with_assembly_plan.py sha256=OfLxrVeZMNJur5xvLZfSJAPica8QWm9ZBzd6OTe54LU 384
examples/multi_assemby_plan/multi_assembly.py sha256=hgfPw1jVRY-KBf8LbMt9D0IWd31WgZ3Uv0rOdGAotTg 1491
tests/test_AssemblyPlan.py sha256=161_BZMLDyXXic0XlnzXpDZHgWBxhlCrMEX0Qt95RJo 374
tests/test_filters.py sha256=VOSon2231dC6TRX4D4hCnTGxXsdVQdIl_lpZMR-8SKQ 529
tests/test_reports.py sha256=UxGGzDbJe6ms9pbIsh_Z2tR7BcBGVaSbTypBitaiHI8 1010
tests/test_sequence_repository.py sha256=Z7PUHELg9EkkJ2WJfePF9tP1KXsdjdGl9u4aqOqBBNU 857
tests/test_type2S_assembly.py sha256=ARwwj2-I1tpqsxFupeoSNMIINJzwl-EuMwovLQAMF18 2219
tests/test_BASIC_assembly/test_BASIC_assembly.py sha256=VMBNEIl9Ckx25D91gtZaX5FJAAQkTPhlJOE4k06Pg7s 1210
tests/test_autoselect_connectors/test_autoselect_connectors.py sha256=I8JODkBOz-FRApyVBquySNXrPUgjhyAx-sV8CpCNY4Q 1127
tests/test_biotools/test_biotools.py sha256=u1yadQ23QOsP-Tvy-VsvmBXpEZsJjiZgKgpr9nEQ4iE 1960
tests/test_combinatorial_type2s/test_combinatorial_type2s.py sha256=JM7QO5G2XywqVutnFbrsPF44bKCwgcsqelgdVQMOgv0 1921
tests/test_fragments/test_fragments.py sha256=OWzvV8sH5Tmm0gExA9QqJgZOGUXV7vhMkyCUtkadyZM 2038
tests/test_gibson/test_gibson.py sha256=RixZLcQcsz3Gj87b5Q7RlCSrBp_gjx75KSC6-9wMVN4 2234
tests/test_hierarchical_biobrick/test_hierarchical_biobrick.py sha256=3xDLE-7Y6Fh6n2x5iw0D5BfI6_R_XzJb7_OsQ84WhAw 823
tests/test_hierarchical_type2s/test_hierarchical_type2s.py sha256=eiqx0k18fZTT7AiM5jELgBatFV4XuWr099tuoCvEbQQ 1740
tests/test_lcr_assembly/test_lcr_assembly.py sha256=Fpa9aDnuo6yvKf8JugSyCHKEOkqv69Wz6-_kvjHGPZc 766
tests/test_utils/test_utils.py sha256=RAXM_gw2FebVe5xHQ9TRx89hRJm7blSewIn91sRwZtM 2249
dnacauldron-2.0.11.dist-info/METADATA sha256=IHk1Jadqd3QCyXbYtY1aDaf0opXjb7FlFgVpSlgXGxw 2132
dnacauldron-2.0.11.dist-info/WHEEL sha256=CmyFI0kx5cdEMTLiONQRbGQwjIoR1aIYB7eCAQ4KPJ0 91
dnacauldron-2.0.11.dist-info/entry_points.txt sha256=gIki8wnOU12UBLqpFiqA75mX7nbQuPH77O899bL6UHs 53
dnacauldron-2.0.11.dist-info/top_level.txt sha256=-cL7Lm14I7aPzwBStcMsxJK7UwoK8xanbTZJrsV3i20 27
dnacauldron-2.0.11.dist-info/RECORD — —

top_level.txt

dnacauldron
examples
tests

entry_points.txt

[console_scripts]
dnacauldron = dnacauldron.cli:main