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decombinator

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5.0.0.dev0 decombinator-5.0.0.dev0-py3-none-any.whl

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Project: decombinator
Version: 5.0.0.dev0
Filename: decombinator-5.0.0.dev0-py3-none-any.whl
Download: [link]
Size: 47670
MD5: 27ae680edb9e84d88af912fa7082a7eb
SHA256: af2879fbc7ccc461354a788ef22a912fc3154faf78c64b93e98f5b1db7260b85
Uploaded: 2024-08-29 12:26:18 +0000

dist-info

METADATA · WHEEL · RECORD · top_level.txt · entry_points.txt

METADATA

Metadata-Version: 2.1
Name: decombinator
Version: 5.0.0.dev0
Summary: A fast and efficient tool for the analysis of T-cell receptor repertoire sequences produced by deep sequencing.
Maintainer-Email: "Matthew V. Cowley" <m.cowley[at]ucl.ac.uk>
Project-Url: Homepage, https://github.com/innate2adaptive/Decombinator
Project-Url: Bug Tracker, https://github.com/innate2adaptive/Decombinator/issues
Keywords: decombinator,TCR,TCRseq,repertoire,sequence,analysis
Classifier: Development Status :: 5 - Production/Stable
Classifier: Intended Audience :: Science/Research
Classifier: Topic :: Scientific/Engineering :: Bio-Informatics
Classifier: License :: OSI Approved :: MIT License
Classifier: Programming Language :: Python :: 3.9
Classifier: Programming Language :: Python :: 3.10
Classifier: Programming Language :: Python :: 3.11
Classifier: Programming Language :: Python :: 3.12
Requires-Python: >=3.9
Requires-Dist: acora (==2.4)
Requires-Dist: biopython (==1.84)
Requires-Dist: contourpy (==1.2.1)
Requires-Dist: coverage (==7.5.4)
Requires-Dist: cycler (==0.12.1)
Requires-Dist: fonttools (==4.53.1)
Requires-Dist: igraph (==0.11.6)
Requires-Dist: iniconfig (==2.0.0)
Requires-Dist: joblib (==1.4.2)
Requires-Dist: kiwisolver (==1.4.5)
Requires-Dist: Levenshtein (==0.25.1)
Requires-Dist: logomaker (==0.8)
Requires-Dist: matplotlib (==3.9.2)
Requires-Dist: networkx (==3.2.1)
Requires-Dist: numpy (==2.0.0)
Requires-Dist: packaging (==24.1)
Requires-Dist: pandas (==2.2.2)
Requires-Dist: pillow (==10.4.0)
Requires-Dist: pluggy (==1.5.0)
Requires-Dist: polyleven (==0.8)
Requires-Dist: pyparsing (==3.1.2)
Requires-Dist: pyrepseq (==1.5)
Requires-Dist: python-dateutil (==2.9.0.post0)
Requires-Dist: pytz (==2024.1)
Requires-Dist: rapidfuzz (==3.9.4)
Requires-Dist: regex (==2024.5.15)
Requires-Dist: scikit-learn (==1.5.1)
Requires-Dist: scipy (==1.13.1)
Requires-Dist: seaborn (==0.13.2)
Requires-Dist: six (==1.16.0)
Requires-Dist: texttable (==1.7.0)
Requires-Dist: threadpoolctl (==3.5.0)
Requires-Dist: tidytcells (==2.1.3)
Requires-Dist: tzdata (==2024.1)
Requires-Dist: pytest (==8.2.2); extra == "dev"
Requires-Dist: pytest-cov (==5.0.0); extra == "dev"
Provides-Extra: dev
Description-Content-Type: text/markdown
License-File: LICENCE
License-File: AUTHORS
[Description omitted; length: 40176 characters]

WHEEL

Wheel-Version: 1.0
Generator: setuptools (74.0.0)
Root-Is-Purelib: true
Tag: py3-none-any

RECORD

Path Digest Size
decombinator/__init__.py sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU 0
decombinator/__main__.py sha256=df-_v-zP0eozb7li7TzESvtxTeyA5XWH4BaYbLuwnvI 35
decombinator/collapse.py sha256=d25I9SCq32bM8tnDqlJTpD8I4JAKQ7rrZmXK8y8qYjs 41693
decombinator/decombine.py sha256=B-r16xufBIuZgulHpkxW8OslFIlQYQ9dtss6L_Pic5w 45701
decombinator/io.py sha256=5E_HUJcRftjU46fhfOUf0zR-Sof6_T719auKZyrdvic 16524
decombinator/pipeline.py sha256=lGTaUya2T524Uf2u8qUbC-4a2m9iHvfiCDR3UOg5hC0 1709
decombinator/translate.py sha256=FHRhV5DiVykx4clLVGNlEgCnfaB7orSR-8ugNAbSgcc 21160
decombinator-5.0.0.dev0.dist-info/AUTHORS sha256=yFQ-H2sCeWca1Wr-xMmDJBTTH7Bsil-Tv1q2b7TMdTs 282
decombinator-5.0.0.dev0.dist-info/LICENCE sha256=R_QQrxNtbsveHd-JrsKZ42-cohUZzUXXLCiU1AOmewE 1081
decombinator-5.0.0.dev0.dist-info/METADATA sha256=sHtiWZ8gTvwwa2KqjO8eMJJRIvlpId3FPT9EPTjqD9s 42387
decombinator-5.0.0.dev0.dist-info/WHEEL sha256=UvcQYKBHoFqaQd6LKyqHw9fxEolWLQnlzP0h_LgJAfI 91
decombinator-5.0.0.dev0.dist-info/entry_points.txt sha256=YD1yUBeQm7RJKwXCM6LsxeHl8QegaTVepeKJFxgBeWk 60
decombinator-5.0.0.dev0.dist-info/top_level.txt sha256=wpq5rl8gG0AuLHo2FR6xf2DMT9sdo_FvBtdy7bJNzxM 13
decombinator-5.0.0.dev0.dist-info/RECORD — —

top_level.txt

decombinator

entry_points.txt

[console_scripts]
decombinator = decombinator.pipeline:main