Reverse Dependencies of ctxcore
The following projects have a declared dependency on ctxcore:
- bengrn — benchmarking gene regulatory networks
- ikarus — no summary
- loomxpy — Python package to create .loom files (compatible with SCope) and extend them with other data (e.g.: SCENIC regulons)
- omicverse — OmicVerse: A single pipeline for exploring the entire transcriptome universe
- sigc — gene signature score for gene expression matrix
- SOAPy-st — Spatial Omics Analysis in Python
- STACCI — STACCI for STCase
- STCase — Spatial Transcriptomics cell-cell Communication and subtype exploration
- StereoUtils — scanpy extra function for STOmics
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