Reverse Dependencies of colorcet
The following projects have a declared dependency on colorcet:
- aclustermap — Convert YAMLized pandas DataFrame to Seaborn clustermap
- ai4scr-athena — ATHENA package provides methods to analyse spatial heterogeneity in spatial omics data
- ark-analysis — Toolbox for analysis on segmented images from MIBI.
- arpes — Modular data analysis code for angle resolved photoemission spectroscopy (ARPES)
- arrakis-nd — Arrakis module for near detector data.
- astroCAST — Package to analyze calcium fluorescence events in astrocytes
- AttosecondRayTracing — Attosecond Ray Tracing visualisation package
- auto-pi-lot — Distributed behavioral experiments
- azureml-automl-dnn-vision — AutoML DNN Vision Models
- bebi103 — Python utilities for the Caltech course BE/Bi 103: Data Analysis in the Biological Sciences.
- biochatter — Backend library for conversational AI in biomedicine
- biocircuits — Utilities to accompany *Biological Circuit Design* by Michael Elowitz and Justin Bois.
- bioimage_embed — no summary
- blendernc — Blender add-on to import datasets (netCDF, grib, and zarr)
- bokeh-catplot — DEPRECATED. Utility to generate plots with categorical variables using Bokeh.
- brainsight — Analysis toolkit for brain activity data.
- Broad-GenePy — A useful module for any CompBio
- captest — Framework and methods to facilitate photovoltaic facility capacity testing following ASTM E2848.
- cbig-network-correspondence — A toolbox for exploring network correspondence across atlases
- CellGen — CellGen: a computational model for predicting the cellular response to diverse perturbation
- chart-builder — A library for building customizable charts in Python
- cloudbandPy — A Python package for atmospheric cloud bands detection.
- cmap — Scientific colormaps for python, without dependencies
- cobra-ai — Package to preprocess ontologies, train OntoVAE and COBRA models and obtain TF and pathway activities.
- colorcet — Collection of perceptually uniform colormaps
- combinatorial-gwas — A package for the final project of MIT's 6.874 class Deep Learning in Life Science
- confirms — Comprehension of trade term sheets and confirmations
- convince — Better instruction following for large language models
- crfm-helm — Benchmark for language models
- crl-datacube — Utilities for scaling geospatial analyses
- crusty — A convinience python package for HPC computation, large dataset handling and plotting.
- cxas — Segmentation of 159 anatomical classes for Chest X-Rays.
- cytoself — An image feature extractor with self-supervised learning
- das — DAS
- das_unsupervised — Tools for unsupervised classification of acoustic signals.
- datamapplot — A library for presentation and publication ready plots of data maps
- dcctk — Diachronic Character-based Corpus toolkit
- ddmtools — A Python library for doing differential dynamic microscopy on polydisperse samples
- decorrelation — An InSAR postprocessing tool
- deeplabcut-live — Class to load exported DeepLabCut networks and perform pose estimation on single frames (from a camera feed)
- deepvisiontools — Overlay of PyTorch to generalize trainning and inference processes for detection, instance segmentation and semantic segmentation tasks.
- detectools — Overlay of PyTorch to generalize trainning and inference processes for detection & instance segmentation tasks.
- dexp — Light-sheet Dataset EXploration and Processing
- discotoolkit — DISCOtoolkit is an python package that allows users to access data and use the tools provided by the DISCO database.
- domaps — Python library for dynamic organellar maps
- drcell — GUI to generate, cluster and optimize dimensionality reduction output
- dtumathtools — A plotting package for the Mathematics 1 course at the Technical University of Denmark
- dynamo-release — Mapping Vector Field of Single Cells
- epmatools — Tools to manipulate EPMA analyses
- evosegment — A tool for segmentation of grayscale evolution from 4D tomograhphy data (or other images)
- FastFuels — 3D fuelscapes for the contiguous US
- femtoscope — Python code for solving nonlinear PDEs from modified gravity models on unbounded domains
- fmot — Femtosense Model Optimization Toolkit
- geo-data-utils — Geology Data Utils
- geovista — Cartographic rendering and mesh analytics powered by PyVista
- Gewel — Python animation tools.
- giskard-toolbox — A random collection of tools I find useful for data science.
- gptchem — Use GPT-3 to solve chemistry problems
- grad-descent-visualizer — A package for visualizing test functions and gradient descent.
- h5analysis — Library to analyse, plot, and export data stored in HDF5 files.
- hgct — Hanzi Glyph Corpus Toolkit
- hicrepcm — no summary
- holoviews — A high-level plotting API for the PyData ecosystem built on HoloViews.
- hvplot — A high-level plotting API for the PyData ecosystem built on HoloViews.
- instanseg-torch — Package for instanseg-torch PyPi
- iqplot — Generate Bokeh plots for data sets with one quantitative variable.
- isoplot — Generate figures from Isocor output
- itkwidgets — Interactive Jupyter widgets to visualize images, point sets, and meshes in 2D and 3D
- Jvis-learn — A generalization of t-SNE and UMAP to single-cell multimodal omics
- kaleidoscope — Kaleidoscope
- kydlib — Routines for exploratory data analysis.
- lattpy — Simple and efficient Python package for modeling d-dimensional Bravais lattices in solid state physics.
- leaderbot — Leaderboard for chatbots
- lidbox — End-to-end spoken language identification (LID) on TensorFlow
- linmo — Package for Lineage Motif Analysis. Extracts statistically over- or under- represented cell fate patterns within a set of lineage trees.
- locan — Analysis software for single-molecule localization microscopy
- ltlcross-runner — Python wrapper around tool ltlcross from Spot library
- ltlcross-wrapper — Python wrapper around tool ltlcross from Spot library
- mapintel — MapIntel is a system for acquiring intelligence from vast collections of text data by representing each document as a multidimensional vector that captures its own semantics. The system is designed to handle complex Natural Language queries and visual exploration of the corpus.
- marchalib — A. Marchal library
- mcot.cifti — CIFTI/greyordinate interface
- mcot.surface — surface interface
- medaprep — no summary
- moraine — Modern Radar Interferometry Environment, A simple, stupid InSAR postprocessing tool in big data era
- nanslice — Scripts to slice and display neuroimages (probably stored in nifti format)
- napari-points2regions — A napari plugin for Points2Regions
- navarp — Navigation tool for ARPES data.
- neogidashboard — Dashboard for visualizing data
- netcdfella — Netcdfella is providing multiple ways to convert netcdf filed into other data types such as ASCII, PNG and JPG, and even create graphs.
- neurosis — A neural network trainer (for weebs)
- nmma — A nuclear physics multi-messenger Bayesian inference library
- nmrquant — Quantify metabolites from 1D Proton NMR experiments
- omniplate — For analysing and meta-analysing plate-reader data
- Oncodrive3D — Oncodrive3D is a method designed to analyse patterns of somatic mutations across tumors to identify three-dimensional (3D) clusters of missense mutations and detect genes that are under positive selection.
- onelearn — Machine learning algorithms for online learning
- onto-vae — Package to preprocess ontologies, train OntoVAE models and obtain pathway activities.
- opentnsim — The OpenTNSim package aims to facilitate the analysis of network performance for different network configurations, fleet compositions and traffic rules.
- Orange-Spectroscopy — Extends Orange to handle spectral and hyperspectral analysis.
- Patchview — Patchview perform data analysis and visualization on whole-cell recording data, including firing pattern analysis, event analysis, synatpic connection detection, morphorlocial analysis and more.
- peempy — Python tool for processing XMCD PEEM data
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