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clumps-ptm

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0.0.6 clumps_ptm-0.0.6-py3-none-any.whl

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Project: clumps-ptm
Version: 0.0.6
Filename: clumps_ptm-0.0.6-py3-none-any.whl
Download: [link]
Size: 25480
MD5: 90dee5c263c28e3369b5d4f5a90bec1a
SHA256: 96934b32fe4391c5250fd8baf5470d67ebd1ad5662dd44603f6252b9f9507f1d
Uploaded: 2023-04-17 14:32:09 +0000

dist-info

METADATA · WHEEL · RECORD · top_level.txt · entry_points.txt

METADATA

Metadata-Version: 2.1
Name: clumps-ptm
Version: 0.0.6
Summary: CLUMPS-PTM driver gene discovery using 3D protein structure (Getz Lab).
Author: Shankara Anand
Author-Email: sanand[at]broadinstitute.org
Home-Page: https://github.com/getzlab/CLUMPS-PTM
Keywords: cancer,bioinformatics,genomics,proteomics,proteins,alphafold,post-translational modifications,phosphorylation,acetylation
Classifier: Development Status :: 3 - Alpha
Classifier: Programming Language :: Python :: 3
Classifier: Intended Audience :: Science/Research
Classifier: Topic :: Scientific/Engineering :: Bio-Informatics
Classifier: Typing :: Typed
Classifier: License :: OSI Approved :: MIT License
Requires-Python: >=3.6
Requires-Dist: matplotlib (>=3.2.1)
Requires-Dist: twobitreader (>=3.1.7)
Requires-Dist: statsmodels (>=0.9.0)
Requires-Dist: scipy (>=1.3.0)
Requires-Dist: pyopenssl (>=19.0.0)
Requires-Dist: prody (>=1.10.10)
Requires-Dist: lxml (>=4.3.4)
Requires-Dist: biopython (>=1.73)
Requires-Dist: tqdm (>=4.32.1)
Requires-Dist: agutil
Description-Content-Type: text/markdown
[Description omitted; length: 3687 characters]

WHEEL

Wheel-Version: 1.0
Generator: bdist_wheel (0.34.2)
Root-Is-Purelib: true
Tag: py3-none-any

RECORD

Path Digest Size
clumpsptm/__init__.py sha256=uMItRKmERjLi8vqMgwaEEOUs4b5nKjE-tlhUCgbgImk 178
clumpsptm/__main__.py sha256=TKjr_SNucerBsblzfzV4cONnCowrRjd2QniuhhMED7w 9817
clumpsptm/pdbstore.py sha256=lz3WTv5ZXKh7UOUj9y2V4ICwEqa1aomHJq6ksbZLraw 16099
clumpsptm/utils.py sha256=s7tLjNmSgdBzgZqvVCWpkG9Kso65hkW__LRSMzvGvpY 7361
clumpsptm/clumps/__init__.py sha256=zU83ddZoxfmfs1RIzrzppmxJy89jNuQGv73F83xHW34 110
clumpsptm/clumps/engine.py sha256=D8CD30aUpKKbmWhMm8oUAZjVay_9lN1HUamscy51Cao 1594
clumpsptm/clumps/funcs.py sha256=TVrPkFRopDl08mJx-9fPRmb6aftniV_Pe3gtqyF3_ac 1724
clumpsptm/mapping/__init__.py sha256=7SeEMmsaTFh1EIDEK5gALAImwWSvupLvqIjLTojr1n0 256
clumpsptm/mapping/blast.py sha256=bu1quhAmewJFJzTUJuu9yOgCvBi5RimIU4QaDjomo6k 6619
clumpsptm/mapping/ref.py sha256=CtCXtAmpqXaYyEeYqjaee5jfCqVuG7JQy620lwg6jVs 11913
clumpsptm/samplers/__init__.py sha256=4tKCYZ5p3sJtaEKu8BaF1tWo2A7o9LMhWayoXaMtJRw 45
clumpsptm/samplers/ptm.py sha256=tgRQq0P3Yd9Z3G1qCR_ErfVFjCeXtp1LjqiueFfC_6E 2069
clumpsptm/vis/__init__.py sha256=NUcqcOSJoKrSolKClt1CRwfkY6ppQqY2CIuOKO80pk0 109
clumpsptm/vis/mol.py sha256=43emq2RGRbJMRFCjYZ-o6PZ21tHV2gF40bmPdxY_Cjw 4691
clumpsptm/vis/plotting.py sha256=cDh808Gd73SOizSAhIHggGLUVljNhDJB6alrQS3SLro 4742
clumps_ptm-0.0.6.dist-info/LICENSE sha256=bLh0ydHq_19lMOKPMyWQVewzCitOQe0fRq0pGgKIp7s 1064
clumps_ptm-0.0.6.dist-info/METADATA sha256=Mm3r9RRdjT01LkKAHWLds65RXRXG0_xffqfVrKRBdO4 4777
clumps_ptm-0.0.6.dist-info/WHEEL sha256=g4nMs7d-Xl9-xC9XovUrsDHGXt-FT0E17Yqo92DEfvY 92
clumps_ptm-0.0.6.dist-info/entry_points.txt sha256=bEPU0S-sJlm66EG1ALj-BYAsrkJiJKbPBU8WRNkY58Y 55
clumps_ptm-0.0.6.dist-info/top_level.txt sha256=hDd58_8ABBsDu5d6YF3aEZSCvfO61N5DAlgML8Xdpfc 10
clumps_ptm-0.0.6.dist-info/RECORD — —

top_level.txt

clumpsptm

entry_points.txt

[console_scripts]
clumpsptm = clumpsptm.__main__:main