Wheelodex » Projects » chloroscan

chloroscan

View on PyPI — Reverse Dependencies (0)

0.1.1 chloroscan-0.1.1-py3-none-any.whl

Wheel Details

Project: chloroscan
Version: 0.1.1
Filename: chloroscan-0.1.1-py3-none-any.whl
Download: [link]
Size: 43131
MD5: 060a32b742806079388420791affb47d
SHA256: f9f9c4c739016235ae0e4c2835cf042b2433481a1fbc9013a4ace0bc8fe7e4d3
Uploaded: 2024-12-02 10:35:38 +0000

dist-info

METADATA · WHEEL · RECORD · entry_points.txt

METADATA

Metadata-Version: 2.1
Name: chloroscan
Version: 0.1.1
Summary: A computational workflow designed to recover plastid genomes from metagenomes.
Author: Andy Tong, Robert Turnbull, Vanessa Rossetto Marcelino, Heroen Verbruggen
License: Apache-2.0
Classifier: License :: OSI Approved :: Apache Software License
Classifier: Programming Language :: Python :: 3
Classifier: Programming Language :: Python :: 3.8
Classifier: Programming Language :: Python :: 3.9
Classifier: Programming Language :: Python :: 3.10
Classifier: Programming Language :: Python :: 3.11
Classifier: Programming Language :: Python :: 3.12
Classifier: Programming Language :: Python :: 3.13
Requires-Python: >=3.8,<4.0
Requires-Dist: gitpython (<4.0.0,>=3.1.32)
Requires-Dist: numpy (<2)
Requires-Dist: pandas (>=2.0)
Requires-Dist: snk-cli (<0.2.0,>=0.1.2)
Description-Content-Type: text/x-rst
[Description omitted; length: 1374 characters]

WHEEL

Wheel-Version: 1.0
Generator: poetry-core 1.9.1
Root-Is-Purelib: true
Tag: py3-none-any

RECORD

Path Digest Size
chloroscan/__init__.py sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU 0
chloroscan/cli/__init__.py sha256=fwdr-wU2KOk5v6I3nS12wFE6ChLbl7le7gADlN5MmCk 97
chloroscan/config/ChloroScan.init.yaml sha256=RODawaBEhtYxC8m_GsqbRnnuVLLtnYxP1pehyTKAr00 1579
chloroscan/config/ChloroScan.snk.yaml sha256=j_bTh9dcyVbWR8LV8_L1YVTGbbxJroMbjo5mPI7NvDQ 1537
chloroscan/config/config.TARA.yaml sha256=D0hYfXgDQxzES4tUDZCGQyO-3nXX51pLgG1qsSYR7Us 1656
chloroscan/config/config.default.yaml sha256=p2oLTmOWwdFSUPvVBWfXZKICQkFr9hT3oSrpFmXVsU0 1536
chloroscan/config/config.paper.yaml sha256=sN8-jd7Hi5l4WoIAqz91oZCoMcEWcPQKU1I6DVg05DE 1680
chloroscan/config/config.template.yaml sha256=kkWHIsnj-Ye_i1bSaBFGK6xaXj9dtsejO1ingP23QAI 1745
chloroscan/config/config.zero.yaml sha256=JQijDXZ0CbiktgOn0HNLHD3y46Rc5qNwXG7Sr6hUK3g 1853
chloroscan/snk.yaml sha256=t3sFbAnmYuK4zEGMpgP2E2ZXkWRa5IDSxdIf47MatHY 3784
chloroscan/workflow/Snakefile sha256=sKzqXpPLrbMy8zRByf1SEnxde6aCfg6ERIClztqI5e0 16274
chloroscan/workflow/__init__.py sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU 0
chloroscan/workflow/envs/CAT_env.yml sha256=fnV8hE3OHqhAqVE9Mbo3Nhk9X3ytWKunn2PhhU6ElrM 144
chloroscan/workflow/envs/DepthCall.yml sha256=Ltm0ipByX0O3oUJ9m22hS-AuRd2jY4weCyXz85OtdqI 179
chloroscan/workflow/envs/binny.post-deploy.sh sha256=WZf-fABA2D9OdEr1LrSix_WmbwNrf-QBLOXFbJg9E0Q 1941
chloroscan/workflow/envs/binny.yml sha256=z_L9ShJuJhiWqgaWdhXqKIlD0pw45TppgWFe8P4BmCs 175
chloroscan/workflow/envs/corgi_env.yml sha256=m-VmAXMothGJzrRCAmuH1b5aLTKTITUCakLHJNjiwrE 139
chloroscan/workflow/envs/documenting_binny.yml sha256=qKNslJgq0vl_xssk1hxHZiCCU0MtdILDa-kVL_8qSSs 106
chloroscan/workflow/envs/gffread.post-deploy.sh sha256=EW3JzweITUQgNUv_oPuUXo7RwuYaSAvevpjtjIK0U3U 1509
chloroscan/workflow/envs/gffread.yml sha256=YNcoHPH3hUuRTo9LuXbtbh-a5TuR3NarMgRLQB8b6_M 78
chloroscan/workflow/envs/krona.post-deploy.sh sha256=0XYO84sqaV-iey3uQ_sM6kL_JTJeawofrAOxSfvBaM4 291
chloroscan/workflow/envs/krona.yml sha256=R4hEHY6ZjLm7jzWQVBIBhNK79hUctvaglXrkoEd-jYM 101
chloroscan/workflow/envs/refinement.yml sha256=_rt3NmgbCbOVXFn_GXGBlLrKM8IRz-pHCSAGEHKg3I8 141
chloroscan/workflow/envs/visualization.yml sha256=gxxcHodOaxncGhmLNypI39p-jpdxOIc63-Be6QKM1Oc 178
chloroscan/workflow/scripts/calcAvgCoverage.pl sha256=KCW2RqZ8tJe2oikJ-0y1INBTDJluvBtsjn6D7fW2fBQ 769
chloroscan/workflow/scripts/call_contig_depth.sh sha256=Kl_oQkBCDG_EzfW3b80D_syxXGDdbCX_t8vj0m6LGic 956
chloroscan/workflow/scripts/cds-extraction.sh sha256=8gcZ4p4TV4Jk1MmCj7qcSeligGJsoXvopTvG4NXWDvA 1782
chloroscan/workflow/scripts/corgi-fasta_filter.py sha256=GUhWW-Ovmmo9Ah6JWnlOSwzgGafkoQnXZrQIu-i3ms4 2321
chloroscan/workflow/scripts/corgi-gather_accession.sh sha256=nAreLTgbLoxSMXasr3-KUk8PNHIFlwG1Ie8t-cSBLCc 1395
chloroscan/workflow/scripts/create_taxonomy_profile.py sha256=07kVzdyqSjgIvfugRtPnhUjPi2fIeMLxSx9pwHNA5wo 1886
chloroscan/workflow/scripts/create_yaml.sh sha256=9dGFxaK1HHddGB7X2bYue84OZDQQ9snEzSHhr8uWSeY 5731
chloroscan/workflow/scripts/merge_contig_depth.sh sha256=zEbGRIhMQs02w08SOAoEyGBITBgEUnTkkMIOpdSNcCk 627
chloroscan/workflow/scripts/refine_bins.py sha256=mg2cjayFlGoAzK_zBp-FiJCtWlQDMq_euHwZFw5ZrGE 6484
chloroscan/workflow/scripts/summarization_utils.py sha256=elDCVjIIpZqrBGv5nvdw2N3_JcDVdNbRKxDmnfLVZpk 4679
chloroscan/workflow/scripts/summarize_binny_results.py sha256=r8noUJxKSIEUeCHRUdDmdxr-8rMsEfNWxlnZryYMQPk 3931
chloroscan/workflow/scripts/visualization.py sha256=fOJXrhZYjNDTqasDwvUwKBPMQHYH4DjHtqo-C5vPU2A 8080
chloroscan/workflow/scripts/visualization_utils.py sha256=6lbsYX-OMM4UrLcMP1I9jG1B-128kOh4AJCPpYLiV2E 3550
chloroscan-0.1.1.dist-info/LICENSE sha256=xx0jnfkXJvxRnG63LTGOxlggYnIysveWIZ6H3PNdCrQ 11357
chloroscan-0.1.1.dist-info/METADATA sha256=XpwnfJS_z8eD2zv3ksVtClmA6vDW7hgsrBYl3gjJIsk 2238
chloroscan-0.1.1.dist-info/WHEEL sha256=Nq82e9rUAnEjt98J6MlVmMCZb-t9cYE2Ir1kpBmnWfs 88
chloroscan-0.1.1.dist-info/entry_points.txt sha256=usujwwDC54NEzruickcgTE3_nXCRtjxxjGmc5YazQYI 56
chloroscan-0.1.1.dist-info/RECORD — —

entry_points.txt

[console_scripts]
chloroscan = chloroscan.cli:chloroscan