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Digest |
Size |
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cgecore-2.0.0.dist-info/entry_points.txt |
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cgecore/__init__.py |
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cgecore/alignment.py |
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cgecore/alignment/KMA/__init__.py |
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cgecore/alignment/KMA/alignment_files.md |
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cgecore/alignment/__init__.py |
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cgecore/alignment/blast/__init__.py |
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cgecore/alignment/read_alignment.md |
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cgecore/alignment/read_alignment.py |
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cgecore/applications/Blast.md |
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cgecore/applications/Blast.py |
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cgecore/applications/KMA.md |
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cgecore/applications/KMA.py |
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cgecore/applications/README.md |
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cgecore/applications/__init__.py |
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cgecore/applications/command.md |
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cgecore/blaster/blaster.py |
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cgecore/blaster/known_issues.txt |
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cgecore/blaster/run_blaster.py |
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cgecore/blaster/tests/unit_tests.py |
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cgecore/cgefinder.py |
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cgecore/input/__init__.py |
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cgecore/input/check_input_files.py |
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cgecore/input/config.py |
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cgecore/input/handling_args.py |
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cgecore/input/markdown_documents/__init__.py |
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cgecore/input/markdown_documents/amr_abbreviations.md |
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cgecore/input/markdown_documents/environment_variables.md |
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cgecore/input/markdown_documents/species_abbreviations.md |
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cgecore/input/output/__init__.py |
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cgecore/input/output/exceptions.py |
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cgecore/input/output/gene_result.py |
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cgecore/input/output/orderedset.py |
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cgecore/input/output/phenotype_result.py |
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cgecore/input/output/seq_variation_result.py |
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cgecore/input/output/std_results.py |
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cgecore/input/output/table.py |
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cgecore/input/phenotype2genotype/__init__.py |
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cgecore/input/phenotype2genotype/abclassdef.py |
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cgecore/input/phenotype2genotype/dbhit.py |
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cgecore/input/phenotype2genotype/feature.py |
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cgecore/input/phenotype2genotype/isolate.py |
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21598 |
cgecore/input/phenotype2genotype/phenodbpoint.py |
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cgecore/input/phenotype2genotype/phenotype.py |
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cgecore/input/phenotype2genotype/res_profile.py |
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43030 |
cgecore/input/phenotype2genotype/res_sumtable.py |
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10548 |
cgecore/input/phenotype2genotype/test_antibiotics.md |
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cgecore/input/phenotype2genotype/test_isolate.md |
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cgecore/input/pointfinder.py |
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cgecore/input/test_config.md |
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cgecore/input/test_config.py |
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cgecore/organisminfo/__init__.py |
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cgecore/organisminfo/gram_neg.txt |
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cgecore/organisminfo/gram_pos.txt |
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cgecore/organisminfo/gramstain.py |
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cgecore-2.0.0.dist-info/RECORD |
— |
— |