Path |
Digest |
Size |
cellvit_light/__init__.py |
sha256=s2manHG8sFVlW5NI-iQaSunTl4ZyZov14E8bqmepnrI
|
147 |
cellvit_light/base_ml/__init__.py |
sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU
|
0 |
cellvit_light/base_ml/base_cli.py |
sha256=qBRshDygSu49IMJn8b1JvB1JACwnwbV1eNkPUDv58rI
|
4541 |
cellvit_light/base_ml/base_early_stopping.py |
sha256=n0dUdqeQFb1Qxvq3BK99w54xocJ_qWkwBJqDebZiNkA
|
2757 |
cellvit_light/base_ml/base_experiment.py |
sha256=y7xqgn1N3DqJDISu4mtbL9IHN5nnTEBux4DZI-If_zE
|
13129 |
cellvit_light/base_ml/base_loss.py |
sha256=xQNHKTBz6WSNXOqlIIvfqW09za0ewrL3-2xYGnTkLJA
|
43875 |
cellvit_light/base_ml/base_optim.py |
sha256=IZzPSZwWywVRUMYb-p-iRm4J7zUVRLSkqxwk76m9mJI
|
640 |
cellvit_light/base_ml/base_trainer.py |
sha256=y501ADn6IFGV3mswzxBtDUDNxrj41Zs1k_g_0tMEkfI
|
10350 |
cellvit_light/base_ml/base_utils.py |
sha256=8g_swirSGnn-_Vj6vbv467R6boLr1M24Yvj6Nyz55Yg
|
3857 |
cellvit_light/base_ml/base_validator.py |
sha256=EMo9lrXT0LPoaClHFwifULHvhEsMb6XZ-WxLq1Q68fI
|
425 |
cellvit_light/cell_segmentation/__init__.py |
sha256=wF7b4Y2iJa7R0iewbfVK1ahvimwtamgxbEQZECMpk1c
|
209 |
cellvit_light/cell_segmentation/run_cellvit.py |
sha256=DQc2qEl-Mg23Y2lZjK0mIdP90sPAf1aC4cPU7fluS7s
|
3768 |
cellvit_light/cell_segmentation/run_cpp_net.py |
sha256=lqf-EVi82oul3gEEvZ_5v3Ik2spwZmeJ655PF2zvNbM
|
3400 |
cellvit_light/cell_segmentation/run_stardist.py |
sha256=L47tH9MyRtW-G82_Uqyl7cpbzpJmzLrU_8mSJjy-sMw
|
3438 |
cellvit_light/cell_segmentation/datasets/base_cell.py |
sha256=riLqZfd-N5nSB9sL3nllcBI_Bv7fIvdQbA89xEsDgq8
|
2820 |
cellvit_light/cell_segmentation/datasets/cell_graph_datamodel.py |
sha256=vgfjQhyUwW5CCR0nmkXff9c56cdo65zBoM4JPxKsrug
|
566 |
cellvit_light/cell_segmentation/datasets/conic.py |
sha256=FcZJbtQ8ukWCorCH7G7ke0GJbXS_dmx8m262Kodx-h0
|
9948 |
cellvit_light/cell_segmentation/datasets/consep.py |
sha256=1xfnxymWLmB_xmQB8hGgsZP1h-PprGRMtGF_tS2cOo8
|
3891 |
cellvit_light/cell_segmentation/datasets/dataset_coordinator.py |
sha256=ptASnLb8FNeSS0r2FxDeUbyMxFjovu8G4DC-PETSj_A
|
2620 |
cellvit_light/cell_segmentation/datasets/monuseg.py |
sha256=kjo4LmLmouJ05CX9aLyxP4eStySc1uUBLZTNx-RqHuM
|
4359 |
cellvit_light/cell_segmentation/datasets/pannuke.py |
sha256=Z9gwNJi3UaZdoPG9UCXTpdR7UULvA8Q-60kbJPEhqUk
|
21190 |
cellvit_light/cell_segmentation/datasets/prepare_monuseg.py |
sha256=HpqCHNsSCP73NZk42XOBSwaAtgMQaCfUOP81VGwR_bg
|
4125 |
cellvit_light/cell_segmentation/datasets/prepare_pannuke.py |
sha256=OLyqsUZU0JHJlUopdmXiMN-4wznYhCXhxJ6A2VOu7bA
|
3209 |
cellvit_light/cell_segmentation/inference/__init__.py |
sha256=NRtFhIZv2jykZaBQb465N-tZUonSOLb_SbeTIjFm_xE
|
201 |
cellvit_light/cell_segmentation/inference/cell_detection.py |
sha256=UbzFU61AlUTqQcvmY0BU8dIeMJIXstg8phGD3TJuSTE
|
46784 |
cellvit_light/cell_segmentation/trainer/__init__.py |
sha256=i_Gmnone8U7UHxUXNP9NlM7kLG6Qd-jVU-XwODSm6hs
|
183 |
cellvit_light/cell_segmentation/trainer/trainer_cellvit.py |
sha256=4FteHqeGxoW59cidJxAyB1ozulELS45Lyc9sWtYzR3s
|
41189 |
cellvit_light/cell_segmentation/trainer/trainer_cpp_net.py |
sha256=Z5y0kVM8Dt_jTs74allidpGNcDY3Ro3V6D643S48Gf0
|
9454 |
cellvit_light/cell_segmentation/trainer/trainer_stardist.py |
sha256=8Gf_XJ1dypQUsJX1qVcuFY_c9M0zN3a1PVhMvFh7Vl0
|
25197 |
cellvit_light/cell_segmentation/utils/__init__.py |
sha256=uIBvF6aqtWhbH9t3XGTRfN0AN-POxwuk7FYyG_D10GM
|
159 |
cellvit_light/cell_segmentation/utils/metrics.py |
sha256=sLqbx5Ch15jVj8q_iX8heMI5h6grEt4wV5TJko58C8Y
|
9180 |
cellvit_light/cell_segmentation/utils/post_proc_cellvit.py |
sha256=gu_sp271vdn0zw0ViCnivH2Pbvif3OiEabsR0jHVbC4
|
13160 |
cellvit_light/cell_segmentation/utils/post_proc_stardist.py |
sha256=2QLGhGystxtENuIQ9P0_L_toBzlxqOO9Te8Z7HkuHb8
|
5560 |
cellvit_light/cell_segmentation/utils/template_geojson.py |
sha256=LKGfsJyVsp6pVz2ezLQFuGRk6ZBEIVtOJTwii-HHfMY
|
1209 |
cellvit_light/cell_segmentation/utils/tools.py |
sha256=Pa6Sewo6VuY-bDTlyZVoZr0x53c1unYTCFdAlA0Byjc
|
12150 |
cellvit_light/configs/__init__.py |
sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU
|
0 |
cellvit_light/configs/python/__init__.py |
sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU
|
0 |
cellvit_light/configs/python/config.py |
sha256=4Rp873LyjhJpjrNZS47M85sMdz4Gmo4o5lbsKKqtVeA
|
1321 |
cellvit_light/datamodel/__init__.py |
sha256=Ntl7muReObqCrzySZLwAYpWxx0iG0kEikeIZF9vRUk0
|
165 |
cellvit_light/datamodel/graph_datamodel.py |
sha256=5oKLDPGijaytruYBBj2L-Fsu9UaaQCkrsesCXdHEknM
|
897 |
cellvit_light/datamodel/wsi_datamodel.py |
sha256=kvPU1WLhI7Aw0lSaFX6-VBg8HoB7or0MSSHHq_YPjAs
|
6774 |
cellvit_light/models/__init__.py |
sha256=jnWNndCaovMfThd3bsqBJLn7UZcpcKTtdPF3VF3rVsk
|
197 |
cellvit_light/models/encoders/__init__.py |
sha256=5YY2oJKFXSRpjdRLQ5ekQhrUvVy7ePj2iO30BGkRhhg
|
118 |
cellvit_light/models/encoders/VIT/vits_histo.py |
sha256=j1HB7ejBcUQ3C8IcbQBRBywegZioKUdvGUxldL7TAFY
|
22678 |
cellvit_light/models/encoders/VIT/SAM/__init__.py |
sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU
|
0 |
cellvit_light/models/encoders/VIT/SAM/image_encoder.py |
sha256=J0QiSz-JoOaU3Zt8GqSuot2QVc7iLwfvLl9R8Tq775Q
|
14881 |
cellvit_light/models/encoders/VIT/SAM/utils.py |
sha256=xxVeNebTwsVXACfs0d9M6DJr_BQhPchTL1SIDx7Cd6g
|
1699 |
cellvit_light/models/segmentation/cell_segmentation/__init__.py |
sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU
|
0 |
cellvit_light/models/segmentation/cell_segmentation/cellvit.py |
sha256=Fwxostff2mzqgxKBpnO_utFuv9eDSf8JMkhM7t_Bix4
|
30627 |
cellvit_light/models/segmentation/cell_segmentation/cellvit_cpp_net.py |
sha256=vy5cUoW-Ns_KdFI0UVsqUz9x2KcpguyzNKhHsn2FdOk
|
26143 |
cellvit_light/models/segmentation/cell_segmentation/cellvit_shared.py |
sha256=5LCjiivRcSD7UPITURUXP1QjWtn0nSRHH30NAM18iBA
|
21302 |
cellvit_light/models/segmentation/cell_segmentation/cellvit_stardist.py |
sha256=pHq5g09dxQ-xsTRoehegaQjedqZ_JRlDD2dCbyNiJbI
|
19930 |
cellvit_light/models/segmentation/cell_segmentation/cellvit_stardist_shared.py |
sha256=Oz_y75i9ORkakdPg6SRmfyv__awLtLUrQoP7e_r-_IY
|
21735 |
cellvit_light/models/segmentation/cell_segmentation/cpp_net_stardist_rn50.py |
sha256=Gibxd1AkfjZjKP6Ut5LJ1yAk385Gv7WLiWi7Je2bRTo
|
25973 |
cellvit_light/models/segmentation/cell_segmentation/utils.py |
sha256=cRQezXS9N2j5jv--N3Ui6i3ZWSadrrg0l9iap8WumjI
|
8085 |
cellvit_light/models/utils/__init__.py |
sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU
|
0 |
cellvit_light/models/utils/attention.py |
sha256=D47-pHIWzdHtHmrwf6c6bdsagvqhl3w1OYc-YQviAbk
|
5443 |
cellvit_light/models/utils/dense.py |
sha256=tBFgdmhTVU9zZX8K8wC2XNUJbHpJ6cvkVa3HBnDseoU
|
5452 |
cellvit_light/models/utils/residual.py |
sha256=x5BRhM9hx2mUeVcXaSDwlJyXdYN15AuN0_yduYKZfeU
|
5072 |
cellvit_light/models/utils/tf_utils.py |
sha256=OeB0v41IFR_0u0h3hwQTXVvNOWh-xni8CRlXgW1PnGM
|
1038 |
cellvit_light/models/utils/tools.py |
sha256=_7Sc-maMP2P361Anl19_HyPRNyzy8dfp-UQVWw5hZVg
|
927 |
cellvit_light/preprocessing/__init__.py |
sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU
|
0 |
cellvit_light/preprocessing/encoding/datasets/__init__.py |
sha256=5YY2oJKFXSRpjdRLQ5ekQhrUvVy7ePj2iO30BGkRhhg
|
118 |
cellvit_light/preprocessing/encoding/datasets/patched_wsi_inference.py |
sha256=S0TfBuCdPybnyCbTVwoShLJ4PmqZpgFPLF8DPsLiYIk
|
2946 |
cellvit_light/preprocessing/patch_extraction/__init__.py |
sha256=-ivpf2Olt_q78Nt-_-dgUojFafhpO103Ye9Gjn7voos
|
120 |
cellvit_light/preprocessing/patch_extraction/main_extraction.py |
sha256=WVvsVLZ_ar7KIpiikSf4r9cMS3IK-QVYeJuVdz44qm8
|
1116 |
cellvit_light/preprocessing/patch_extraction/scripts/macenko.py |
sha256=wRMPilFDPX-U5KTVmNWXG1mKx13eYYAVNYmbXxGgDZg
|
988 |
cellvit_light/preprocessing/patch_extraction/src/__init__.py |
sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU
|
0 |
cellvit_light/preprocessing/patch_extraction/src/cli.py |
sha256=Gaxe4QG8U-yb7HLS4HIduaEmeA5yhd1mNJK6siVLKKo
|
36622 |
cellvit_light/preprocessing/patch_extraction/src/cucim_deepzoom.py |
sha256=emr2VIohUQteLcENU72P3LdLqJMuDOOGMDRsMwEpzCU
|
2730 |
cellvit_light/preprocessing/patch_extraction/src/patch_extraction.py |
sha256=DWmUNvTMBD6Baxglz35gG8AQCQVRyQdM9GnseT_b1dU
|
47864 |
cellvit_light/preprocessing/patch_extraction/src/process_batch.py |
sha256=mGLwC4o6hq8HPbAxXjg5hxA3I5nQns2vla0dsFGzuno
|
9672 |
cellvit_light/preprocessing/patch_extraction/src/storage.py |
sha256=goHdF95-6ef2gZOIb0Pv-YN08VEqLHI8LkidM9y1Q_U
|
9225 |
cellvit_light/preprocessing/patch_extraction/src/utils/exceptions.py |
sha256=mZcTFwO8GYsseefTLAn3moqfECxM9lAl6fYiDb5UiMI
|
608 |
cellvit_light/preprocessing/patch_extraction/src/utils/masking.py |
sha256=kGMiJaosXK_i1qOOKD9sDkC8VN2TB4EgPhwwjH0klHs
|
10621 |
cellvit_light/preprocessing/patch_extraction/src/utils/patch_dataset.py |
sha256=yyZNubLT3oxpcwXDT5W-iZKEUs2ztxwqzTp-UXbXHbA
|
1156 |
cellvit_light/preprocessing/patch_extraction/src/utils/patch_util.py |
sha256=-sRPh1FmXSLlUzr0XsvG1xEc8Q058_j780B_7wL_YZw
|
48369 |
cellvit_light/preprocessing/patch_extraction/src/utils/plotting.py |
sha256=a7rPCxPIY3Zo1TT5wOcHK88e6ameG1PZtrY_edhwGK4
|
10770 |
cellvit_light/utils/__init__.py |
sha256=-ivpf2Olt_q78Nt-_-dgUojFafhpO103Ye9Gjn7voos
|
120 |
cellvit_light/utils/file_handling.py |
sha256=6i0ZXjFY_a1AfpXz3rzcXHvGjp6sOGG-8Pv8Vd1E3mY
|
626 |
cellvit_light/utils/logger.py |
sha256=ZMrgnajLhLSQrICc4mhcUgpZgN10exmOVCDqWzZOwRE
|
4239 |
cellvit_light/utils/tools.py |
sha256=Spg23uWHU5VuzValS3PRSt4mbGMkegpwR7zV-gU3eXA
|
7407 |
cellvit_light-0.0.5.dist-info/LICENSE |
sha256=zeYRyN3esjJEnLsbJ-f6zqO5AGh8Cyp4L3kg4fccfBw
|
1307 |
cellvit_light-0.0.5.dist-info/METADATA |
sha256=1ABW-ZpAg9GKqPz5ZcYV-RP73-TBTy4fy0uWOV40Yek
|
1344 |
cellvit_light-0.0.5.dist-info/WHEEL |
sha256=HiCZjzuy6Dw0hdX5R3LCFPDmFS4BWl8H-8W39XfmgX4
|
91 |
cellvit_light-0.0.5.dist-info/top_level.txt |
sha256=Kcxtr_EdOjobVFTQ8lkRnrsmrhkTuPUI5mINZfHc2l0
|
14 |
cellvit_light-0.0.5.dist-info/RECORD |
— |
— |