cellvit-light

View on PyPIReverse Dependencies (0)

0.0.5 cellvit_light-0.0.5-py3-none-any.whl

Wheel Details

Project: cellvit-light
Version: 0.0.5
Filename: cellvit_light-0.0.5-py3-none-any.whl
Download: [link]
Size: 200372
MD5: 6b9f875711a40c9cd92682116ec2b49d
SHA256: b71baafb74d4ced60f3b87848276e5c80d8bcd0c68b0f83daa8d0700f9b1265f
Uploaded: 2024-08-16 14:19:27 +0000

dist-info

METADATA

Metadata-Version: 2.1
Name: cellvit_light
Version: 0.0.5
Requires-Python: >=3.9
Requires-Dist: pydantic (==1.10.4)
Requires-Dist: geojson
Requires-Dist: rasterio
Requires-Dist: ujson
Requires-Dist: pandarallel
Description-Content-Type: text/markdown
License-File: LICENSE
[Description omitted; length: 1071 characters]

WHEEL

Wheel-Version: 1.0
Generator: setuptools (72.2.0)
Root-Is-Purelib: true
Tag: py3-none-any

RECORD

Path Digest Size
cellvit_light/__init__.py sha256=s2manHG8sFVlW5NI-iQaSunTl4ZyZov14E8bqmepnrI 147
cellvit_light/base_ml/__init__.py sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU 0
cellvit_light/base_ml/base_cli.py sha256=qBRshDygSu49IMJn8b1JvB1JACwnwbV1eNkPUDv58rI 4541
cellvit_light/base_ml/base_early_stopping.py sha256=n0dUdqeQFb1Qxvq3BK99w54xocJ_qWkwBJqDebZiNkA 2757
cellvit_light/base_ml/base_experiment.py sha256=y7xqgn1N3DqJDISu4mtbL9IHN5nnTEBux4DZI-If_zE 13129
cellvit_light/base_ml/base_loss.py sha256=xQNHKTBz6WSNXOqlIIvfqW09za0ewrL3-2xYGnTkLJA 43875
cellvit_light/base_ml/base_optim.py sha256=IZzPSZwWywVRUMYb-p-iRm4J7zUVRLSkqxwk76m9mJI 640
cellvit_light/base_ml/base_trainer.py sha256=y501ADn6IFGV3mswzxBtDUDNxrj41Zs1k_g_0tMEkfI 10350
cellvit_light/base_ml/base_utils.py sha256=8g_swirSGnn-_Vj6vbv467R6boLr1M24Yvj6Nyz55Yg 3857
cellvit_light/base_ml/base_validator.py sha256=EMo9lrXT0LPoaClHFwifULHvhEsMb6XZ-WxLq1Q68fI 425
cellvit_light/cell_segmentation/__init__.py sha256=wF7b4Y2iJa7R0iewbfVK1ahvimwtamgxbEQZECMpk1c 209
cellvit_light/cell_segmentation/run_cellvit.py sha256=DQc2qEl-Mg23Y2lZjK0mIdP90sPAf1aC4cPU7fluS7s 3768
cellvit_light/cell_segmentation/run_cpp_net.py sha256=lqf-EVi82oul3gEEvZ_5v3Ik2spwZmeJ655PF2zvNbM 3400
cellvit_light/cell_segmentation/run_stardist.py sha256=L47tH9MyRtW-G82_Uqyl7cpbzpJmzLrU_8mSJjy-sMw 3438
cellvit_light/cell_segmentation/datasets/base_cell.py sha256=riLqZfd-N5nSB9sL3nllcBI_Bv7fIvdQbA89xEsDgq8 2820
cellvit_light/cell_segmentation/datasets/cell_graph_datamodel.py sha256=vgfjQhyUwW5CCR0nmkXff9c56cdo65zBoM4JPxKsrug 566
cellvit_light/cell_segmentation/datasets/conic.py sha256=FcZJbtQ8ukWCorCH7G7ke0GJbXS_dmx8m262Kodx-h0 9948
cellvit_light/cell_segmentation/datasets/consep.py sha256=1xfnxymWLmB_xmQB8hGgsZP1h-PprGRMtGF_tS2cOo8 3891
cellvit_light/cell_segmentation/datasets/dataset_coordinator.py sha256=ptASnLb8FNeSS0r2FxDeUbyMxFjovu8G4DC-PETSj_A 2620
cellvit_light/cell_segmentation/datasets/monuseg.py sha256=kjo4LmLmouJ05CX9aLyxP4eStySc1uUBLZTNx-RqHuM 4359
cellvit_light/cell_segmentation/datasets/pannuke.py sha256=Z9gwNJi3UaZdoPG9UCXTpdR7UULvA8Q-60kbJPEhqUk 21190
cellvit_light/cell_segmentation/datasets/prepare_monuseg.py sha256=HpqCHNsSCP73NZk42XOBSwaAtgMQaCfUOP81VGwR_bg 4125
cellvit_light/cell_segmentation/datasets/prepare_pannuke.py sha256=OLyqsUZU0JHJlUopdmXiMN-4wznYhCXhxJ6A2VOu7bA 3209
cellvit_light/cell_segmentation/inference/__init__.py sha256=NRtFhIZv2jykZaBQb465N-tZUonSOLb_SbeTIjFm_xE 201
cellvit_light/cell_segmentation/inference/cell_detection.py sha256=UbzFU61AlUTqQcvmY0BU8dIeMJIXstg8phGD3TJuSTE 46784
cellvit_light/cell_segmentation/trainer/__init__.py sha256=i_Gmnone8U7UHxUXNP9NlM7kLG6Qd-jVU-XwODSm6hs 183
cellvit_light/cell_segmentation/trainer/trainer_cellvit.py sha256=4FteHqeGxoW59cidJxAyB1ozulELS45Lyc9sWtYzR3s 41189
cellvit_light/cell_segmentation/trainer/trainer_cpp_net.py sha256=Z5y0kVM8Dt_jTs74allidpGNcDY3Ro3V6D643S48Gf0 9454
cellvit_light/cell_segmentation/trainer/trainer_stardist.py sha256=8Gf_XJ1dypQUsJX1qVcuFY_c9M0zN3a1PVhMvFh7Vl0 25197
cellvit_light/cell_segmentation/utils/__init__.py sha256=uIBvF6aqtWhbH9t3XGTRfN0AN-POxwuk7FYyG_D10GM 159
cellvit_light/cell_segmentation/utils/metrics.py sha256=sLqbx5Ch15jVj8q_iX8heMI5h6grEt4wV5TJko58C8Y 9180
cellvit_light/cell_segmentation/utils/post_proc_cellvit.py sha256=gu_sp271vdn0zw0ViCnivH2Pbvif3OiEabsR0jHVbC4 13160
cellvit_light/cell_segmentation/utils/post_proc_stardist.py sha256=2QLGhGystxtENuIQ9P0_L_toBzlxqOO9Te8Z7HkuHb8 5560
cellvit_light/cell_segmentation/utils/template_geojson.py sha256=LKGfsJyVsp6pVz2ezLQFuGRk6ZBEIVtOJTwii-HHfMY 1209
cellvit_light/cell_segmentation/utils/tools.py sha256=Pa6Sewo6VuY-bDTlyZVoZr0x53c1unYTCFdAlA0Byjc 12150
cellvit_light/configs/__init__.py sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU 0
cellvit_light/configs/python/__init__.py sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU 0
cellvit_light/configs/python/config.py sha256=4Rp873LyjhJpjrNZS47M85sMdz4Gmo4o5lbsKKqtVeA 1321
cellvit_light/datamodel/__init__.py sha256=Ntl7muReObqCrzySZLwAYpWxx0iG0kEikeIZF9vRUk0 165
cellvit_light/datamodel/graph_datamodel.py sha256=5oKLDPGijaytruYBBj2L-Fsu9UaaQCkrsesCXdHEknM 897
cellvit_light/datamodel/wsi_datamodel.py sha256=kvPU1WLhI7Aw0lSaFX6-VBg8HoB7or0MSSHHq_YPjAs 6774
cellvit_light/models/__init__.py sha256=jnWNndCaovMfThd3bsqBJLn7UZcpcKTtdPF3VF3rVsk 197
cellvit_light/models/encoders/__init__.py sha256=5YY2oJKFXSRpjdRLQ5ekQhrUvVy7ePj2iO30BGkRhhg 118
cellvit_light/models/encoders/VIT/vits_histo.py sha256=j1HB7ejBcUQ3C8IcbQBRBywegZioKUdvGUxldL7TAFY 22678
cellvit_light/models/encoders/VIT/SAM/__init__.py sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU 0
cellvit_light/models/encoders/VIT/SAM/image_encoder.py sha256=J0QiSz-JoOaU3Zt8GqSuot2QVc7iLwfvLl9R8Tq775Q 14881
cellvit_light/models/encoders/VIT/SAM/utils.py sha256=xxVeNebTwsVXACfs0d9M6DJr_BQhPchTL1SIDx7Cd6g 1699
cellvit_light/models/segmentation/cell_segmentation/__init__.py sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU 0
cellvit_light/models/segmentation/cell_segmentation/cellvit.py sha256=Fwxostff2mzqgxKBpnO_utFuv9eDSf8JMkhM7t_Bix4 30627
cellvit_light/models/segmentation/cell_segmentation/cellvit_cpp_net.py sha256=vy5cUoW-Ns_KdFI0UVsqUz9x2KcpguyzNKhHsn2FdOk 26143
cellvit_light/models/segmentation/cell_segmentation/cellvit_shared.py sha256=5LCjiivRcSD7UPITURUXP1QjWtn0nSRHH30NAM18iBA 21302
cellvit_light/models/segmentation/cell_segmentation/cellvit_stardist.py sha256=pHq5g09dxQ-xsTRoehegaQjedqZ_JRlDD2dCbyNiJbI 19930
cellvit_light/models/segmentation/cell_segmentation/cellvit_stardist_shared.py sha256=Oz_y75i9ORkakdPg6SRmfyv__awLtLUrQoP7e_r-_IY 21735
cellvit_light/models/segmentation/cell_segmentation/cpp_net_stardist_rn50.py sha256=Gibxd1AkfjZjKP6Ut5LJ1yAk385Gv7WLiWi7Je2bRTo 25973
cellvit_light/models/segmentation/cell_segmentation/utils.py sha256=cRQezXS9N2j5jv--N3Ui6i3ZWSadrrg0l9iap8WumjI 8085
cellvit_light/models/utils/__init__.py sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU 0
cellvit_light/models/utils/attention.py sha256=D47-pHIWzdHtHmrwf6c6bdsagvqhl3w1OYc-YQviAbk 5443
cellvit_light/models/utils/dense.py sha256=tBFgdmhTVU9zZX8K8wC2XNUJbHpJ6cvkVa3HBnDseoU 5452
cellvit_light/models/utils/residual.py sha256=x5BRhM9hx2mUeVcXaSDwlJyXdYN15AuN0_yduYKZfeU 5072
cellvit_light/models/utils/tf_utils.py sha256=OeB0v41IFR_0u0h3hwQTXVvNOWh-xni8CRlXgW1PnGM 1038
cellvit_light/models/utils/tools.py sha256=_7Sc-maMP2P361Anl19_HyPRNyzy8dfp-UQVWw5hZVg 927
cellvit_light/preprocessing/__init__.py sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU 0
cellvit_light/preprocessing/encoding/datasets/__init__.py sha256=5YY2oJKFXSRpjdRLQ5ekQhrUvVy7ePj2iO30BGkRhhg 118
cellvit_light/preprocessing/encoding/datasets/patched_wsi_inference.py sha256=S0TfBuCdPybnyCbTVwoShLJ4PmqZpgFPLF8DPsLiYIk 2946
cellvit_light/preprocessing/patch_extraction/__init__.py sha256=-ivpf2Olt_q78Nt-_-dgUojFafhpO103Ye9Gjn7voos 120
cellvit_light/preprocessing/patch_extraction/main_extraction.py sha256=WVvsVLZ_ar7KIpiikSf4r9cMS3IK-QVYeJuVdz44qm8 1116
cellvit_light/preprocessing/patch_extraction/scripts/macenko.py sha256=wRMPilFDPX-U5KTVmNWXG1mKx13eYYAVNYmbXxGgDZg 988
cellvit_light/preprocessing/patch_extraction/src/__init__.py sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU 0
cellvit_light/preprocessing/patch_extraction/src/cli.py sha256=Gaxe4QG8U-yb7HLS4HIduaEmeA5yhd1mNJK6siVLKKo 36622
cellvit_light/preprocessing/patch_extraction/src/cucim_deepzoom.py sha256=emr2VIohUQteLcENU72P3LdLqJMuDOOGMDRsMwEpzCU 2730
cellvit_light/preprocessing/patch_extraction/src/patch_extraction.py sha256=DWmUNvTMBD6Baxglz35gG8AQCQVRyQdM9GnseT_b1dU 47864
cellvit_light/preprocessing/patch_extraction/src/process_batch.py sha256=mGLwC4o6hq8HPbAxXjg5hxA3I5nQns2vla0dsFGzuno 9672
cellvit_light/preprocessing/patch_extraction/src/storage.py sha256=goHdF95-6ef2gZOIb0Pv-YN08VEqLHI8LkidM9y1Q_U 9225
cellvit_light/preprocessing/patch_extraction/src/utils/exceptions.py sha256=mZcTFwO8GYsseefTLAn3moqfECxM9lAl6fYiDb5UiMI 608
cellvit_light/preprocessing/patch_extraction/src/utils/masking.py sha256=kGMiJaosXK_i1qOOKD9sDkC8VN2TB4EgPhwwjH0klHs 10621
cellvit_light/preprocessing/patch_extraction/src/utils/patch_dataset.py sha256=yyZNubLT3oxpcwXDT5W-iZKEUs2ztxwqzTp-UXbXHbA 1156
cellvit_light/preprocessing/patch_extraction/src/utils/patch_util.py sha256=-sRPh1FmXSLlUzr0XsvG1xEc8Q058_j780B_7wL_YZw 48369
cellvit_light/preprocessing/patch_extraction/src/utils/plotting.py sha256=a7rPCxPIY3Zo1TT5wOcHK88e6ameG1PZtrY_edhwGK4 10770
cellvit_light/utils/__init__.py sha256=-ivpf2Olt_q78Nt-_-dgUojFafhpO103Ye9Gjn7voos 120
cellvit_light/utils/file_handling.py sha256=6i0ZXjFY_a1AfpXz3rzcXHvGjp6sOGG-8Pv8Vd1E3mY 626
cellvit_light/utils/logger.py sha256=ZMrgnajLhLSQrICc4mhcUgpZgN10exmOVCDqWzZOwRE 4239
cellvit_light/utils/tools.py sha256=Spg23uWHU5VuzValS3PRSt4mbGMkegpwR7zV-gU3eXA 7407
cellvit_light-0.0.5.dist-info/LICENSE sha256=zeYRyN3esjJEnLsbJ-f6zqO5AGh8Cyp4L3kg4fccfBw 1307
cellvit_light-0.0.5.dist-info/METADATA sha256=1ABW-ZpAg9GKqPz5ZcYV-RP73-TBTy4fy0uWOV40Yek 1344
cellvit_light-0.0.5.dist-info/WHEEL sha256=HiCZjzuy6Dw0hdX5R3LCFPDmFS4BWl8H-8W39XfmgX4 91
cellvit_light-0.0.5.dist-info/top_level.txt sha256=Kcxtr_EdOjobVFTQ8lkRnrsmrhkTuPUI5mINZfHc2l0 14
cellvit_light-0.0.5.dist-info/RECORD

top_level.txt

cellvit_light