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1.2.5 cehrbert-1.2.5-py3-none-any.whl

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Project: cehrbert
Version: 1.2.5
Filename: cehrbert-1.2.5-py3-none-any.whl
Download: [link]
Size: 139227
MD5: df5cc2e17201bd952fa9d665619cd9bd
SHA256: b7fd45728b3b7ba78a2a2466bab75b1064553ba27f720bf43a9cbd3d05ba3d09
Uploaded: 2024-11-15 14:38:45 +0000

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METADATA · WHEEL · RECORD · top_level.txt · entry_points.txt

METADATA

Metadata-Version: 2.1
Name: cehrbert
Version: 1.2.5
Summary: CEHR-BERT: Incorporating temporal information from structured EHR data to improve prediction tasks
Author-Email: Chao Pang <chaopang229[at]gmail.com>, Xinzhuo Jiang <xj2193[at]cumc.columbia.edu>, Krishna Kalluri <kk3326[at]cumc.columbia.edu>, Nishanth Parameshwar Pavinkurve <np2689[at]cumc.columbia.edu>, Karthik Natarajan <kn2174[at]cumc.columbia.edu>
Project-Url: Homepage, https://github.com/cumc-dbmi/cehr-bert
License: MIT License
Classifier: Development Status :: 5 - Production/Stable
Classifier: Intended Audience :: Developers
Classifier: Intended Audience :: Science/Research
Classifier: License :: OSI Approved :: MIT License
Classifier: Programming Language :: Python :: 3
Requires-Python: >=3.10.0
Requires-Dist: dask (==2024.1.1)
Requires-Dist: dask[dataframe] (==2024.1.1)
Requires-Dist: datasets (==2.16.1)
Requires-Dist: evaluate (==0.4.1)
Requires-Dist: fast-ml (==3.68)
Requires-Dist: femr (==0.2.0)
Requires-Dist: Jinja2 (==3.1.3)
Requires-Dist: meds (==0.3.3)
Requires-Dist: meds-reader (==0.1.9)
Requires-Dist: networkx (==3.2.1)
Requires-Dist: numpy (==1.24.3)
Requires-Dist: packaging (==23.2)
Requires-Dist: pandas (==2.2.0)
Requires-Dist: peft (==0.10.0)
Requires-Dist: Pillow (==10.3.0)
Requires-Dist: pyarrow (==15.0.0)
Requires-Dist: pydantic (==2.6.0)
Requires-Dist: python-dateutil (==2.8.2)
Requires-Dist: PyYAML (==6.0.1)
Requires-Dist: scikit-learn (==1.4.0)
Requires-Dist: scipy (==1.12.0)
Requires-Dist: tensorflow (==2.15.0)
Requires-Dist: tensorflow-datasets (==4.5.2)
Requires-Dist: tqdm (==4.66.1)
Requires-Dist: torch (==2.4.0)
Requires-Dist: tokenizers (==0.15.2)
Requires-Dist: transformers (==4.39.3)
Requires-Dist: accelerate (==0.31.0)
Requires-Dist: Werkzeug (==3.0.1)
Requires-Dist: wandb (==0.17.8)
Requires-Dist: xgboost (==2.0.3)
Requires-Dist: cehrbert-data (==0.0.4)
Requires-Dist: tensorflow-metal (==1.1.0); sys_platform == "darwin"
Requires-Dist: pre-commit; extra == "dev"
Requires-Dist: pytest; extra == "dev"
Requires-Dist: pytest-cov; extra == "dev"
Requires-Dist: pytest-subtests; extra == "dev"
Requires-Dist: rootutils; extra == "dev"
Requires-Dist: hypothesis; extra == "dev"
Requires-Dist: black; extra == "dev"
Provides-Extra: dev
Description-Content-Type: text/markdown
License-File: LICENSE
[Description omitted; length: 7734 characters]

WHEEL

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cehrbert-1.2.5.dist-info/RECORD — —

top_level.txt

cehrbert

entry_points.txt

[console_scripts]
cehrbert-finetuning = cehrbert.runners.hf_cehrbert_finetuning_runner:main
cehrbert-pretraining = cehrbert.runners.hf_cehrbert_pretrain_runner:main