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cazy-webscraper

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2.3.0.4 cazy_webscraper-2.3.0.4-py3-none-any.whl

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Project: cazy-webscraper
Version: 2.3.0.4
Filename: cazy_webscraper-2.3.0.4-py3-none-any.whl
Download: [link]
Size: 215080
MD5: e7764a58afa8e054e9c43f5380c231b9
SHA256: 8cb3d9a418b1da9e8f64bd89a415865cd08142e76429ead1c9f4ec4629af5169
Uploaded: 2024-11-19 16:49:36 +0000

dist-info

METADATA · WHEEL · RECORD · top_level.txt · entry_points.txt

METADATA

Metadata-Version: 2.1
Name: cazy_webscraper
Version: 2.3.0.4
Summary: A tool to automate retrieving data from CAZy, build a local CAZyme SQL database, and throughly interrogating the data. Also, automate retrieving protein data, sequences, EC numbers and structure files for specific datasets in the CAZyme database from UniProt, GenBank and PDB.
Author: Emma E. M. Hobbs
Author-Email: eemh1[at]st-andrews.ac.uk
Home-Page: https://github.com/HobnobMancer/cazy_webscraper
License: MIT
Keywords: bioinforamtics protein webscraper
Classifier: Development Status :: 4 - Beta
Classifier: Environment :: Console
Classifier: Intended Audience :: Science/Research
Classifier: License :: OSI Approved :: MIT License
Classifier: Natural Language :: English
Classifier: Operating System :: POSIX :: Linux
Classifier: Operating System :: MacOS :: MacOS X
Classifier: Programming Language :: Python :: 3.8
Classifier: Topic :: Scientific/Engineering :: Bio-Informatics
Platform: Posix
Platform: MacOS X
Requires-Dist: biopython
Requires-Dist: bioservices (>=1.11.0)
Requires-Dist: mechanicalsoup
Requires-Dist: pandas
Requires-Dist: pyyaml
Requires-Dist: requests
Requires-Dist: saintBioutils (>=0.0.25)
Requires-Dist: sqlalchemy (==1.4.20)
Requires-Dist: tqdm
Requires-Dist: html5lib
Description-Content-Type: text/markdown
License-File: LICENSE
[Description omitted; length: 67185 characters]

WHEEL

Wheel-Version: 1.0
Generator: setuptools (75.5.0)
Root-Is-Purelib: true
Tag: py3-none-any

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cazy_webscraper-2.3.0.4.dist-info/RECORD — —

top_level.txt

cazy_webscraper

entry_points.txt

[console_scripts]
cazy_webscraper = cazy_webscraper.cazy_scraper:main
cw_extract_db_seqs = cazy_webscraper.expand.extract_seqs.extract_db_seqs:main
cw_get_db_schema = cazy_webscraper.sql.get_schema:main
cw_get_genbank_seqs = cazy_webscraper.expand.genbank.sequences.get_genbank_sequences:main
cw_get_genomics = cazy_webscraper.expand.genbank.genomes.get_genome_accs:main
cw_get_gtdb_taxs = cazy_webscraper.expand.gtdb.get_gtdb_tax:main
cw_get_ncbi_taxs = cazy_webscraper.expand.genbank.taxonomy.get_ncbi_taxs:main
cw_get_pdb_structures = cazy_webscraper.expand.pdb.get_pdb_structures:main
cw_get_uniprot_data = cazy_webscraper.expand.uniprot.get_uniprot_data:main
cw_query_database = cazy_webscraper.api.cw_query_database:main