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LICENSE.txt |
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MANIFEST.in |
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README.md |
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pypi_full.rst |
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requirements.txt |
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setup.cfg |
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CAMSA-1.3.data/scripts/agouti2camsa_points.py |
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CAMSA-1.3.data/scripts/agp2camsa_points.py |
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CAMSA-1.3.data/scripts/camsa_points2fasta.py |
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CAMSA-1.3.data/scripts/fasta2camsa_points.py |
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CAMSA-1.3.data/scripts/fasta2camsa_seqi.py |
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CAMSA-1.3.data/scripts/grimm2camsa_points.py |
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CAMSA-1.3.data/scripts/ragout_coords2camsa_points.py |
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CAMSA-1.3.data/scripts/ragout_coords2camsa_seqi.py |
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CAMSA-1.3.data/scripts/ragout_coords2fasta.py |
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CAMSA-1.3.data/scripts/ragout_coords_coverage.py |
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CAMSA-1.3.data/scripts/run_camsa.py |
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CAMSA-1.3.dist-info/METADATA |
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CAMSA-1.3.dist-info/RECORD |
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CAMSA-1.3.dist-info/WHEEL |
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CAMSA-1.3.dist-info/top_level.txt |
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CAMSA.egg-info/PKG-INFO |
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CAMSA.egg-info/SOURCES.txt |
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CAMSA.egg-info/dependency_links.txt |
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CAMSA.egg-info/requires.txt |
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CAMSA.egg-info/top_level.txt |
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camsa/__init__.py |
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camsa/logging.ini |
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camsa/run_camsa.ini |
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camsa/run_camsa.py |
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camsa/core/__init__.py |
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camsa/core/comparative_analysis.py |
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camsa/core/data_structures.py |
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camsa/core/io.py |
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camsa/core/merging.py |
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camsa/core/reference_analysis.py |
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camsa/examples/gage/exp1/sga.camsa.points |
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camsa/examples/gage/exp1/soap2.camsa.points |
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camsa/examples/gage/exp1/sspace.camsa.points |
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camsa/examples/gage/exp2/contigs.camsa.lengths |
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camsa/examples/gage/exp2/contigs.fasta.gz |
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camsa/examples/gage/exp2/gam-ngs.camsa.points |
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camsa/examples/gage/exp2/metassembler.camsa.points |
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camsa/examples/gage/exp2/scaffmatch.camsa.points |
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camsa/examples/gage/exp2/sga.camsa.points |
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camsa/examples/gage/exp2/soap2.camsa.points |
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camsa/examples/gage/exp2/sspace.camsa.points |
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camsa/examples/gage/exp3/gam-ngs.camsa.points |
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camsa/examples/gage/exp3/scaffmatch.camsa.points |
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camsa/examples/gage/exp3/sga.camsa.points |
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camsa/examples/gage/exp3/soap2.camsa.points |
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camsa/examples/gage/exp3/sspace.camsa.points |
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camsa/examples/utils/agp/data/chr_from_component_wgs.agp |
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camsa/examples/utils/agp/data/chr_from_scaffold_wgs.agp |
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camsa/examples/utils/agp/data/scaffold_from_contig_wgs.agp |
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camsa/examples/utils/fasta/data/B_anthracis_Mslice.fasta.gz |
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camsa/examples/utils/fasta/data/B_anthracis_contigs.fasta.gz |
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camsa/examples/utils/fasta/data/abc.fasta |
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camsa/examples/utils/fasta/data/blocks.camsa.seqi |
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camsa/examples/utils/fasta/data/blocks.fasta |
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camsa/examples/utils/fasta/data/dummy.fasta |
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camsa/examples/utils/fasta/data/points/cp2f_abc.camsa.points |
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camsa/examples/utils/fasta/data/points/test_case1.txt |
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camsa/examples/utils/fasta/data/points/test_case3.txt |
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camsa/html/base_template.html |
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camsa/html/comparative_template.html |
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camsa/html/footer_template.html |
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camsa/html/header_template.html |
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camsa/html/info_template.html |
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camsa/html/reference_template.html |
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camsa/libs/css/bootstrap-theme.min.css |
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