Reverse Dependencies of bx-python

The following projects have a declared dependency on bx-python:

• aceofbases — ACEofBASEs, a careful evaluation of BaseEdits
• CAVA — CAVA (Clinical Annotation of VAriants)
• CCTop — CRISPR/Cas Target online predictor
• cobind — collocation analysis of genomics intervals
• cpgtools — Tools to analyze and visualize DNA methylation data
• CrossMap — CrossMap -- Lift over genomics coordinates between assemblies.
• galaxy-app — Galaxy application (backend)
• galaxy-data — Galaxy datatype framework and datatypes
• genomvar — Sequence variant analysis in Python
• kdap — KDAP is a package to analyze knowledge data
• mapGL — Prediction of lineage-specific gain and loss of sequence elements using phylogenetic maximum parsimony.
• methylartist — Tools for parsing and plotting nanopore methylation data
• pyeasyfuse — EasyFuse is a pipeline to detect fusion transcripts from RNA-seq data with high accuracy.
• pyGenomeTracks — Command-line tool to make beautiful and reproducible genome browser snapshots
• qtl — Utilities for analyzing and visualizing QTL data
• regsnp-intron — Predict disease-causing probability of human intronic SNVs.
• RSeQC — QC package for RNA-seq data.
• sequana — A set of standalone application and pipelines dedicated to NGS analysis
• tin-score-calculation — no summary
• ZeaGeneMap — A python tool for identifying the mapping of genes between two genomes.