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0.3.6 brainlit-0.3.6-py3-none-any.whl

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Project: brainlit
Version: 0.3.6
Filename: brainlit-0.3.6-py3-none-any.whl
Download: [link]
Size: 100103
MD5: 93f2fe52776ad4f37a98348ae429c624
SHA256: d13490239fab3e063aea15b42ef2988fc2c04d2bc88270d8aea8ab3ff4c76f1b
Uploaded: 2023-05-18 00:48:00 +0000

dist-info

METADATA · WHEEL · RECORD · top_level.txt · entry_points.txt

METADATA

Metadata-Version: 2.1
Name: brainlit
Version: 0.3.6
Summary: Code to process and analyze brainlit data
Author: ('Thomas Athey, Bijan Varjivand, Ryan Lu, Matt Figdore, Alex Fiallos, Stanley Wang, Victor Wang',)
Author-Email: tathey1[at]jhu.edu
Home-Page: https://github.com/neurodata/brainlit
License: Apache License 2.0
Classifier: Development Status :: 3 - Alpha
Classifier: Intended Audience :: Science/Research
Classifier: Topic :: Scientific/Engineering :: Mathematics
Classifier: License :: OSI Approved :: Apache Software License
Classifier: Programming Language :: Python :: 3
Classifier: Programming Language :: Python :: 3.5
Classifier: Programming Language :: Python :: 3.6
Classifier: Programming Language :: Python :: 3.7
Requires-Dist: numpy (==1.23.2)
Requires-Dist: CloudReg
Requires-Dist: aicspylibczi (>=3.0.5)
Requires-Dist: brainrender
Requires-Dist: numpy (>=1.8.1)
Requires-Dist: scikit-image (>=0.16.2)
Requires-Dist: networkx (>=2.1)
Requires-Dist: scikit-learn (==1.1.2)
Requires-Dist: scipy (>=1.1.0)
Requires-Dist: seaborn (>=0.12.2)
Requires-Dist: tifffile (>=2020.7.17)
Requires-Dist: napari[pyqt5] (>=0.2.11)
Requires-Dist: PyQt5 (<=5.15.7)
Requires-Dist: cloud-volume (>=4.2.0)
Requires-Dist: feather-format (==0.4.1)
Requires-Dist: ome-zarr (>=0.6.0)
Requires-Dist: zarr (>=2.10.2)
Requires-Dist: h5py (>=3.3.0)
Requires-Dist: similaritymeasures (>=0.4.4)
Requires-Dist: statannotations (>=0.4.4)
Requires-Dist: igneous-pipeline
Description-Content-Type: text/markdown
License-File: LICENSE
[Description omitted; length: 2262 characters]

WHEEL

Wheel-Version: 1.0
Generator: bdist_wheel (0.40.0)
Root-Is-Purelib: true
Tag: py3-none-any

RECORD

Path Digest Size
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brainlit/BrainLine/__init__.py sha256=wIznHyPe0Dh8jO90VC4AZ2hne122zCBnTbhPll_FPNQ 346
brainlit/BrainLine/analyze_results.py sha256=bFTvzDHLKXVXwKh_LIsriXcaLd-NHM40CadLwhcEYdI 44949
brainlit/BrainLine/apply_ilastik.py sha256=riq0bT23Zh2WMUqduTnTW9c-rCoqbN_ClHL-StUZzHU 30859
brainlit/BrainLine/imports.py sha256=OPX27QdxRKU5mgJZBcakGWnsHgJ6tXKJk-RaaeANWik 394
brainlit/BrainLine/parse_ara.py sha256=kbhhiqQDKIYiCYgyulp8F13E7BRm_mX548EO_Wz0aFQ 3778
brainlit/BrainLine/util.py sha256=yTm9GpcrWeHf1Zz9A1paUrpxAiSy9sj059jCvvm4rc8 10962
brainlit/algorithms/__init__.py sha256=f3vCA9ypPIwyC-Je_wfheNKiFjxtu27kTPInzPa_2t0 394
brainlit/algorithms/connect_fragments/__init__.py sha256=JhXJr1wXQI9Mp2mQBV4_ziTuiQGzCfbD28g6T9DpZkg 231
brainlit/algorithms/connect_fragments/trace_evaluation.py sha256=OxiY__4wK2s2kurAsMTyqV45sbpLWeYUeftvRzCC1Go 2239
brainlit/algorithms/connect_fragments/viterbrain.py sha256=LrQVuKFuTHgPjJl5sTgVgmSAPCNQwfQjXgX9dOOy4DE 18206
brainlit/algorithms/detect_somas/__init__.py sha256=QyZed3JjqexJJ03ttv-znOtWMQkhQ31gH5sZoAHlvX0 54
brainlit/algorithms/detect_somas/detect.py sha256=bPTIEn3Tp7O36hiPebE4cHJZOZj-Lk6N84qKy1Fyv80 5191
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brainlit/algorithms/generate_fragments/state_generation.py sha256=BNdg7I__OdZZ_g2EHHTbyht-xKRiGRJKQP5wj3mCiJA 31716
brainlit/algorithms/generate_fragments/tube_seg.py sha256=3_ahwUGsAs4CDvfQVX_WipIp7ZxVwPVIbJ3uwz3rg_Q 6158
brainlit/algorithms/trace_analysis/__init__.py sha256=fcwkgIF7BVYwI4cXOyjU4fVP2PKP4tSxjeeScnDnAQE 121
brainlit/algorithms/trace_analysis/fit_spline.py sha256=jbBunNs1gWYF_2ih-2EOet6v6nmdWuNwpB-gGMKRwrw 17453
brainlit/algorithms/trace_analysis/spline_fxns.py sha256=dutvprl-TOPv3im7gyYVXOnOUZkSnp_u54qtTGkDkoE 11686
brainlit/feature_extraction/__init__.py sha256=zd1G4SpPEqXsACDBUs06-RrUlmGMt595J-cXWkgjb3M 55
brainlit/feature_extraction/base.py sha256=P9bCSCl3kLm_syDbPdHrxRm5JRFMwGSiOJuYpj4bJ5w 12440
brainlit/feature_extraction/neighborhood.py sha256=NvG3YZ8du-xJSxQJL94bO2WtEpzNsHrhDGaHOqQRQ-Y 3332
brainlit/map_neurons/__init__.py sha256=7SK7SLMeoWG_YCNJOEY-hOiuwH-EZUkhBM-Kg9HitKU 92
brainlit/map_neurons/map_neurons.py sha256=3x-ggD2P0MxKI2B4WrRl3OBzkg2lFm99_Bze2LGiJg8 19224
brainlit/napari_viterbrain/viterbrain_plugin.py sha256=7lUl-Q0b5X7TTWYhKlyNJY87Bh8SeJRFUxXA1aIozXs 2049
brainlit/preprocessing/__init__.py sha256=NkPpFAdfh_0doHO4usOzltQSbKg27CAKNOdaSRrwwKU 99
brainlit/preprocessing/image_process.py sha256=Z2buDWfEBNvziGU-jaMceAt8zVeSQboppbLwUsCxzs8 22539
brainlit/preprocessing/preprocess.py sha256=SVk1bwerOlXFEyIsX3hTefzoIwxRfyZoLXaiaMglHrI 8614
brainlit/utils/Neuron_trace.py sha256=T6s8G1wa18ATXR_EHxTeWokYr7sg6TLcBA2zrORzxfA 42070
brainlit/utils/__init__.py sha256=oEbmz1CrtWE13mPZjmMiiZHu3boTnLet57lH1R1Z-0c 232
brainlit/utils/benchmarking_params.py sha256=XZ7FxWNgSBqaSNpU2eolQgZqP8b4xpfWu7q4t9fFfK0 3021
brainlit/utils/session.py sha256=KPXC7bYk7siyzjkCUkGAMmFd2snVUkbAvqzqTVdQPlc 15886
brainlit/utils/upload.py sha256=t3bp_yfplWeYrD5hGyjmVFYZLCg1PJZN0HOK4DNfSfo 20173
brainlit/utils/util.py sha256=MWsAGuvUtZ1UUpV9ps1pXOo1g8aDwH-2wWQCsPkzOPc 2514
brainlit/utils/write.py sha256=YRFcMppZMHSQ-XQFlsG9mTxOZ5Z_1GYZKpTnwO7ZECw 7017
brainlit/viz/__init__.py sha256=R8UIrzRO2iS6sGCGfppyUMG_WgGKnZECvRVIYjfBMd0 37
brainlit/viz/swc2voxel.py sha256=VXixpZuPfD6G5FOM9J_MNAzmwBcV-vjknZvnscKdAl4 7752
brainlit-0.3.6.dist-info/LICENSE sha256=yVuuHRzgI17MzTVgt3LsHvuX80innw--CmNPDCzO_iw 11358
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brainlit-0.3.6.dist-info/entry_points.txt sha256=OkbITuBqzFpsCtY-CLJkOMJIpAUIR_0jniVuO_HqSik 68
brainlit-0.3.6.dist-info/top_level.txt sha256=9VHWqvF9c11CthBi8Hy9muCjYVSFvdCnG-2q4753pKM 9
brainlit-0.3.6.dist-info/RECORD — —

top_level.txt

brainlit

entry_points.txt

[napari.manifest]
brainlit = brainlit.napari_viterbrain:napari.yaml