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bp-quant

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0.6.0 bp_quant-0.6.0-py3-none-any.whl

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Project: bp-quant
Version: 0.6.0
Filename: bp_quant-0.6.0-py3-none-any.whl
Download: [link]
Size: 29899
MD5: 278599e39f1ccc5d4700e93df1a5221b
SHA256: 19eda1ee71f83ad1e6439e6fd63019f7da7b14faa939abca7c7fbcc849fb6593
Uploaded: 2024-10-29 07:47:00 +0000

dist-info

METADATA · WHEEL · RECORD · top_level.txt · entry_points.txt

METADATA

Metadata-Version: 2.1
Name: bp_quant
Version: 0.6.0
Summary: Quantification of reads at defined positions to verify custom input sequences. Given a gene fusion or splicing junction of interest, this tool can quantify RNA-seq reads supporting the breakpoint (or splice junction) by quantifying reads that map to the breakpoint (junction reads) and read pairs that span the breakpoint (spanning pairs).
Author-Email: TRON - Translational Oncology at the University Medical Center of the Johannes Gutenberg University Mainz <patrick.sorn[at]tron-mainz.de>
Maintainer-Email: Patrick Sorn <patrick.sorn[at]tron-mainz.de>, Jonas Ibn-Salem <jonas.ibn-salem[at]tron-mainz.de>, Franziska Lang <franziska.lang[at]tron-mainz.de>, Johannes Hausmann <johannes.hausmann[at]tron-mainz.de>
Project-Url: Homepage, https://github.com/tron-bioinformatics/easyquant
Classifier: Development Status :: 4 - Beta
Classifier: Intended Audience :: Healthcare Industry
Classifier: Intended Audience :: Science/Research
Classifier: Topic :: Scientific/Engineering :: Bio-Informatics
Classifier: Programming Language :: Python :: 3.8
Classifier: Programming Language :: Python :: 3.9
Classifier: Programming Language :: Python :: 3.10
Classifier: Programming Language :: Python :: 3 :: Only
Classifier: License :: OSI Approved :: MIT License
Classifier: Operating System :: Unix
Requires-Python: >=3.8
Requires-Dist: pysam (==0.21.0)
Requires-Dist: matplotlib (==3.5.2)
Requires-Dist: biopython (==1.81)
Description-Content-Type: text/markdown
License-File: LICENSE
[Description omitted; length: 12127 characters]

WHEEL

Wheel-Version: 1.0
Generator: setuptools (75.2.0)
Root-Is-Purelib: true
Tag: py3-none-any

RECORD

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bp_quant/quantification/read_classification.py sha256=koXfJ8jyJ_9Nw2GCIMACyNa5xrnfri4fhy3PZT5r-Cg 5559
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bp_quant-0.6.0.dist-info/RECORD — —

top_level.txt

bp_quant

entry_points.txt

[console_scripts]
bp_quant = bp_quant.general.command_line:bp_quant_cli