Reverse Dependencies of biosimulators-utils
The following projects have a declared dependency on biosimulators-utils:
- biomodels-qc — Tools for quality controlling the BioModels database
- biosimulations-bigg — Command-line program for publishing the BiGG model repository to BioSimulations.
- biosimulations-modeldb — Command-line program for publishing the ModelDB model repository to BioSimulations.
- biosimulators-amici — BioSimulators-compliant command-line interface to the AMICI simulation program <https://github.com/AMICI-dev/amici>.
- biosimulators-bionetgen — BioSimulators-compliant command-line interface to the BioNetGen simulation program <https://bionetgen.org>.
- biosimulators-boolnet — BioSimulators-compliant command-line interface to the BoolNet simulation program.
- biosimulators-cbmpy — BioSimulators-compliant command-line interface to the CBMPy simulation program <http://cbmpy.sourceforge.net/>.
- biosimulators-cobrapy — BioSimulators-compliant command-line interface to the COBRApy simulation program <https://opencobra.github.io/cobrapy/>.
- biosimulators-copasi — BioSimulators-compliant command-line interface to the COPASI simulation program <http://copasi.org>.
- biosimulators-gillespy2 — BioSimulators-compliant command-line interface to the GillesPy2 simulation program.
- biosimulators-ginsim — BioSimulators-compliant command-line interface to the GINsim simulation program.
- biosimulators-libsbmlsim — BioSimulators-compliant command-line interface to LibSBMLsim <http://fun.bio.keio.ac.jp/software/libsbmlsim/>.
- biosimulators-masspy — BioSimulators-compliant command-line interface to the MassPY simulation program <https://masspy.readthedocs.io/>.
- biosimulators-opencor — BioSimulators-compliant command-line interface to the OpenCOR simulation program.
- biosimulators-processes — Core implementations of process-bigraph.composite.Process aligning with BioSimulators simulator tools.
- biosimulators-pyneuroml — BioSimulators-compliant command-line interface to the jNeuroML/pyNeuroML, NEURON, and NetPyNe simulation programs.
- biosimulators-pysces — BioSimulators-compliant command-line interface to the PySCeS simulation program <http://pysces.sourceforge.net/>.
- biosimulators-rbapy — BioSimulators-compliant command-line interface to the RBApy simulation program.
- biosimulators-simularium — A Python tool for converting Biosimulators spatial simulation outputs into a Simularium-compliant format.
- biosimulators-tellurium — BioSimulators-compliant command-line interface to the Tellurium/roadrunner simulator <https://tellurium.readthedocs.io/>.
- biosimulators-test-suite — Tools for validating that biosimulation tools are consistent with the BioSimulators standards
- biosimulators-xpp — BioSimulators-compliant command-line interface to the XPP simulation program.
- smoldyn — Python package for the Smoldyn simulator
- vcell-cli-utils — Python utility package for VCell CLI Java App
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