bionty

View on PyPIReverse Dependencies (4)

1.1.0 bionty-1.1.0-py3-none-any.whl

Wheel Details

Project: bionty
Version: 1.1.0
Filename: bionty-1.1.0-py3-none-any.whl
Download: [link]
Size: 93234
MD5: 356bd3dc357bb5f3dbadddf078e98c23
SHA256: ef430d8e2243b1cae65a672dc50d6ba4456e4ceaa7ae5dee6e6f04b37473aa1b
Uploaded: 2025-02-18 10:20:10 +0000

dist-info

METADATA

Metadata-Version: 2.3
Name: bionty
Version: 1.1.0
Summary: Basic biological entities, coupled to public ontologies [`source <https://github.com/laminlabs/bionty/blob/main/bionty/models.py>`__].
Author-Email: Lamin Labs <laminlabs[at]gmail.com>
Project-Url: Home, https://github.com/laminlabs/bionty
Classifier: License :: OSI Approved :: Apache Software License
Classifier: Programming Language :: Python :: 3.9
Classifier: Programming Language :: Python :: 3.10
Classifier: Programming Language :: Python :: 3.11
Classifier: Programming Language :: Python :: 3.12
Requires-Python: >=3.9,<3.13
Requires-Dist: lamindb (<2,>=1.1a1)
Requires-Dist: lamindb_setup (>=0.81.2)
Requires-Dist: lamin_utils (>=0.13.9)
Requires-Dist: filelock
Requires-Dist: requests
Requires-Dist: pyyaml
Requires-Dist: pronto (<2.5.6,>=2.5.4)
Requires-Dist: laminci; extra == "dev"
Requires-Dist: pre-commit; extra == "dev"
Requires-Dist: requests; extra == "dev"
Requires-Dist: pytest (>=6.0); extra == "dev"
Requires-Dist: pytest-cov; extra == "dev"
Requires-Dist: nbproject-test; extra == "dev"
Requires-Dist: bioregistry; extra == "dev"
Requires-Dist: sqlalchemy; extra == "dev"
Requires-Dist: mysqlclient; extra == "dev"
Requires-Dist: mysql-connector-python; extra == "dev"
Provides-Extra: dev
Description-Content-Type: text/markdown
[Description omitted; length: 841 characters]

WHEEL

Wheel-Version: 1.0
Generator: flit 3.10.1
Root-Is-Purelib: true
Tag: py3-none-any

RECORD

Path Digest Size
bionty/__init__.py sha256=llcxFLvUIPySTZYQn9lnZteie9SRryvwL4X0lHhkxjE 2545
bionty/_bionty.py sha256=xkdUU0QZ6PPzrNOgl5_w-P07vtvCgqf19kQRVpA-kaE 7036
bionty/ids.py sha256=3T1ovXxhhIMfyAgyXvI5x2J6vuxw4yP1XuJJ2TV63-o 1454
bionty/models.py sha256=YP8EinMMBt8_nlOO0jBn2D4lkMOMifR4Vn8PmTuijAA 60685
bionty/base/__init__.py sha256=IzX8ukpAdnoI41Quzsi42bI5WyT9KpNzlFChI9edtdQ 2210
bionty/base/_display_sources.py sha256=4v4Z5HCKAL3s2b-N5bO0gm6yjQszmRWPIfYdVcUlNYQ 1617
bionty/base/_ontology.py sha256=cfuZ1Q-uPpQRn9mW-NX8LEntJ3e2lAU9pHo-fqwbt_8 5524
bionty/base/_public_ontology.py sha256=5faul_0FMJaha7vJ-PL0rfoRvj5G14xvmwM5cIXx914 25241
bionty/base/_settings.py sha256=Ky-yni0F9pkMjD1QtyimTjdIFgV0xBrEplgQBo2cRmk 2529
bionty/base/_sync_sources.py sha256=BOwlyw2u6b5AsDDm0Ozr-3vvpAe_EUzUDmpmh7BDGGk 524
bionty/base/sources.yaml sha256=PC6Car6IaOmohSZ8QUol8lrxLNv01deF7eW-Mu5ZhBU 18235
bionty/base/dev/__init__.py sha256=dSQh8K_bdw2noAe-PR4-BZiLK7R2dkFw4Trvr_r8GXo 111
bionty/base/dev/_handle_sources.py sha256=SHLx7inOkRcSVR_AmvVo53pZJZ_7WxqgNdvjHZptm1w 8404
bionty/base/dev/_io.py sha256=43EMPzuKOxsrYFjuya-v4-QypipcMrt2FmsGPNDOPr4 5302
bionty/base/dev/_md5.py sha256=ugI-i0Kihkmy7lU_bFwL_EqxUKk31IMMGU-ChMchTGw 1021
bionty/base/entities/__init__.py sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU 0
bionty/base/entities/_bfxpipeline.py sha256=qHNSVpBubS8_pdZCjEnoPDxn3YiL8dJXoN8uz9i9FD4 675
bionty/base/entities/_biosample.py sha256=rtAJJaA2BTIdHOLoZwBzHyVI8EgqiFgeWB-N2XNEnYM 714
bionty/base/entities/_cellline.py sha256=3y6vYq_jCiovcCSQ2qLTPPAgznwgml7NzpfNjsJ-pRs 846
bionty/base/entities/_cellmarker.py sha256=4YYLatFc4HDYi2yK9sZKBe8pDmW6WZucBQCDVeuhz38 704
bionty/base/entities/_celltype.py sha256=VEaSkrd-jRmwoxV__P--9lqFAGmdQ9_9dRIVyZQc3_w 1039
bionty/base/entities/_developmentalstage.py sha256=YWUSyurvt0s86xVozS0sxyD6aTG2uI673471kA4jkFY 945
bionty/base/entities/_disease.py sha256=xKmW3Hm-Ai9iwW3iTqJXThIW2HD4R-7k9c3yUVwl-gs 1649
bionty/base/entities/_drug.py sha256=N6-oLJrUw_zIvtBN6ubckdsd8FTrz5zz2ubm4HnwJdw 951
bionty/base/entities/_ethnicity.py sha256=X3GR4rgm2hzzsE2ah9HmN7pRghkJqW8bDCE0pe2ui0Y 807
bionty/base/entities/_experimentalfactor.py sha256=WhDs_1twUh_xa1kjpY_DnSm8cXhHgyW8QiIHx3vSyQI 4321
bionty/base/entities/_gene.py sha256=XHL6xFXehzikmiVG0gg298VJ1EyB9hNMb3C2VZcRipc 12406
bionty/base/entities/_organism.py sha256=FB6iY3Q3hiCkF22dnsojw2rP5MlphjTDUPCxwrY12RE 2979
bionty/base/entities/_pathway.py sha256=i0OV0tuKFGkHT-FmOG_EQz26A6p60MZina8SgND1FQU 800
bionty/base/entities/_phenotype.py sha256=I_I6sF6cuvT5YdS_McmCTRGykhp4247fdcfh0CovcSM 1648
bionty/base/entities/_protein.py sha256=vVxkYl5L6WFEx9gH4D_Q1xmA8PIcFj0ygd7o0sNn1PI 687
bionty/base/entities/_shared_docstrings.py sha256=_MNYfVCZUaC08K7PLnMM8YWsO6vU1e1KbrlCCHpt12I 1280
bionty/base/entities/_tissue.py sha256=3zBVjJ_OtV-A1fbP9cqyABYPR6z2P9Qv3o3hNFWSaAg 1066
bionty/base/scripts/check_ontologies_reachable.py sha256=rmYYG2dMm70OfluyuZ0TWWtACLIQpAONllOdOC1c9Yc 1482
bionty/base/scripts/determine_md5s.py sha256=jczEzw54lxUJfi5tRqNGNElaRz2tOMC51br3lGVREC0 1285
bionty/base/scripts/generate_bfxpipelines.py sha256=E9A2_DMv-h6GPg_EW00q3_BT7qaom4oL5gKPM2ZIHwE 4061
bionty/base/scripts/update_new_ontologies.py sha256=qkMt50mIjyovbEuhNQbz0dYYpt5hRw_u7zc_q0BTLvs 1102
bionty/base/scripts/upload_new_ontologies.py sha256=VUw8zn48ZDOLcNUKxqu-25_iFYfTZ8o2Mwy2r9-S1Qg 1774
bionty/base/scripts/bfxpipelines_info/custom_pipelines.json sha256=sBRQIpPqoXI-tstqnwwqojP_hY2PirjedKiqZtH6UmE 3079
bionty/core/__init__.py sha256=oM51aONsRBCkmEuJUXX2PzAAOpqYL4IbZD1zfSZC95s 503
bionty/core/_add_ontology.py sha256=Jj8JqqwCgsc0HCUSISD4pkm7mcNz1zAdOwQdQNKixfI 6809
bionty/core/_bionty.py sha256=ssUuEa3uaHnootL-aLG8HejbO75DYtBJM9-glNkfzU4 6604
bionty/core/_settings.py sha256=bMBTYlhihfoqRxyehalxFWBfDyW2gD8garDTUmjhX1c 1728
bionty/migrations/0028_squashed.py sha256=nIr_Ljvi75kXW4PFKsnZM1Yap6b04LAYN3FBi11_y5k 79942
bionty/migrations/0029_alter_cellline_previous_runs_and_more.py sha256=YvR0gK59AoZ9vX0Pi0-H4NvsjbNv_19ZAG_vbnVKlW4 2884
bionty/migrations/0030_rename_publicsource_source_and_more.py sha256=ueqPeyznrQwhJdpKzdBTSo8OOogVdAd8RuoM2dK3K0w 6273
bionty/migrations/0031_alter_cellmarker_name_and_more.py sha256=ye91L1hB0jt3gXztKeexNtACBn7ddbJDQKIqNLvpZII 550
bionty/migrations/0032_rename_source_name_source_description_and_more.py sha256=8zqkvwHWv4Akc8O0EFd1nWZ6rFwzFj05EC_3_7dUyP0 2577
bionty/migrations/0033_alter_artifactcellline_artifact_and_more.py sha256=J5ER_UJz9z6uof8Bjb3D2UWIksTSzegBiODBMLHWFwY 15598
bionty/migrations/0034_alter_source_unique_together.py sha256=w7J24aZWiqHd8U0aJZz0B16m516beOcN_n9mh4CgsiU 409
bionty/migrations/0035_alter_protein_gene_symbol.py sha256=pYa0Unw2zTH_ThZyZGaJpLgK52i5ZHkt_eM50C97LNA 469
bionty/migrations/0036_alter_source_artifacts_and_more.py sha256=32kOcB8EMhUHO7U5pPGHhAflTEsmy68m6UTwMI6XK_0 881
bionty/migrations/0037_alter_cellline_source_alter_cellmarker_source_and_more.py sha256=HDfGfzTCrdOhOZyZRodz0YQNsQvcAYPw37Mo2e_D504 3930
bionty/migrations/0038_alter_artifactcellline_created_by_and_more.py sha256=gDA8zUTrpBehz9xiCUQDmTggBmmPdIh7DsGxcsN88eI 19807
bionty/migrations/0039_alter_cellline_source_alter_cellmarker_source_and_more.py sha256=Ihj5loqebUhp8MexakXDwL0Zv82s8FCzu8j3k7UD5To 4383
bionty/migrations/0040_rename_feature_ref_is_symbol_artifactgene_feature_ref_is_name_and_more.py sha256=2VCbK-FPXXUCiAALN6XxnkJRoQQOLKvteUsOccOXb0E 3227
bionty/migrations/0041_alter_artifactcellline_artifact_and_more.py sha256=EFHnhaRPxU0G0QtrA5Rf1Rue7oImJrYO0hfctAHldjU 83056
bionty/migrations/0042_lamindbv1.py sha256=7yiCQTehcuWU_OcU1hOIzmgh7RSgDnhgjR3otTNJDQ4 7152
bionty/migrations/0043_lamindbv2_part2.py sha256=CBE7VP2TkjGG_kipwDYXjekt_K3rebEKqiTJ2tW2J3g 4737
bionty/migrations/0044_alter_cellline_space_alter_cellmarker_space_and_more.py sha256=sIscMgviSNhuAsPBHZ4RIzZ5hGATHJXQ06jgrSgQQus 5270
bionty/migrations/0045_rename_aux_cellline__aux_rename_aux_cellmarker__aux_and_more.py sha256=3j21pt1hrDFQGT14_ATJiNF53sUPf17K_-lehTQjYew 2158
bionty/migrations/0046_alter_cellline__aux_alter_cellmarker__aux_and_more.py sha256=_xg3c4p-4UtXxkZ0J1FJHFR8NZhKVsvSdt7TCiqfwz0 3593
bionty/migrations/0047_lamindbv1_part5.py sha256=KcZW74dczpFfwlTmFEEuss_mdvMxav0BbiohiWVJzZs 4512
bionty/migrations/0048_lamindbv1_part6.py sha256=nw7YauIufdrAilQuJHO1ngYSheYOUuEms0l1hfTskFU 25803
bionty/migrations/0049_alter_schemacellmarker_cellmarker_and_more.py sha256=FR2KDaqxZ44MoYtTzH1TZu9pQ2rXyo7zYkiOE_JcKXY 3046
bionty/migrations/0050_alter_source_uid.py sha256=0z9B8cRr7NPYd6RatZh8iLoUclVZWik40n_owV0fpDs 1163
bionty/migrations/0050_squashed.py sha256=-ZxI-AVnrASbQO8AVGLWbi1XvZkbzSvlGsNeyF_N9wE 124033
bionty/migrations/__init__.py sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU 0
bionty-1.1.0.dist-info/LICENSE sha256=UOZ1F5fFDe3XXvG4oNnkL1-Ecun7zpHzRxjp-XsMeAo 11324
bionty-1.1.0.dist-info/WHEEL sha256=CpUCUxeHQbRN5UGRQHYRJorO5Af-Qy_fHMctcQ8DSGI 82
bionty-1.1.0.dist-info/METADATA sha256=CQlBdf1jPuyIB2rn-RenmJlEFFW7Mm9c-wustz5gKdw 2151
bionty-1.1.0.dist-info/RECORD