bioencoder

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1.0.0 bioencoder-1.0.0-py3-none-any.whl

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Project: bioencoder
Version: 1.0.0
Filename: bioencoder-1.0.0-py3-none-any.whl
Download: [link]
Size: 52875
MD5: b57ffd6d3be9a4eb31f9b96a2daae9ff
SHA256: 70d069c301b51688afa52ec81ea4bfed289bca4dc415bfceb7e633367e5cf338
Uploaded: 2024-07-19 21:24:19 +0000

dist-info

METADATA

Metadata-Version: 2.1
Name: bioencoder
Version: 1.0.0
Summary: A metric learning toolkit
Author-Email: Arthur Porto <agporto[at]gmail.com>, Moritz Lürig <moritz.luerig[at]gmail.com>
Project-Url: Homepage, https://github.com/agporto/BioEncoder
Project-Url: Bug Tracker, https://github.com/agporto/BioEncoder/issues
Keywords: metric learning,biology
Requires-Python: >=3.9
Requires-Dist: albumentations (==1.3.0)
Requires-Dist: bokeh
Requires-Dist: faiss-cpu
Requires-Dist: ipywidgets
Requires-Dist: matplotlib
Requires-Dist: numpy
Requires-Dist: pandas
Requires-Dist: pytorch-metric-learning (==2.0.1)
Requires-Dist: scikit-learn
Requires-Dist: streamlit-option-menu
Requires-Dist: tensorboard
Requires-Dist: timm
Requires-Dist: torch-ema (==0.3.0)
Requires-Dist: torch-lr-finder
Requires-Dist: torch-optimizer (==0.3.0)
Description-Content-Type: text/markdown
License-File: LICENSE
[Description omitted; length: 6113 characters]

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top_level.txt

bioencoder

entry_points.txt

bioencoder_configure = bioencoder.scripts.configure:cli
bioencoder_inference = bioencoder.scripts.inference:cli
bioencoder_interactive_plots = bioencoder.scripts.interactive_plots:cli
bioencoder_lr_finder = bioencoder.scripts.lr_finder:cli
bioencoder_model_explorer = bioencoder.scripts.model_explorer_wrapper:cli
bioencoder_split_dataset = bioencoder.scripts.split_dataset:cli
bioencoder_swa = bioencoder.scripts.swa:cli
bioencoder_train = bioencoder.scripts.train:cli