Wheelodex » Projects » bio-transformers » bio_transformers-0.1.17-py3-none-any.whl

bio-transformers

View on PyPI — Reverse Dependencies (1)

0.1.17 bio_transformers-0.1.17-py3-none-any.whl

Wheel Details

Project: bio-transformers
Version: 0.1.17
Filename: bio_transformers-0.1.17-py3-none-any.whl
Download: [link]
Size: 48643
MD5: d55a0cf8713f994c4ff40ab30f85c8b2
SHA256: 807df84c6946fb5b63f1f09e363d1f582691809b3edcdb6d04a2730906e77e85
Uploaded: 2022-03-01 15:58:14 +0000

dist-info

METADATA · WHEEL · RECORD · top_level.txt

METADATA

Metadata-Version: 2.1
Name: bio-transformers
Version: 0.1.17
Summary: Wrapper on top of ESM/Protbert model in order to easily work with protein embedding
Author: Instadeep
Author-Email: a.delfosse[at]instadeep.com
License: Apache-2.0
Classifier: License :: OSI Approved :: Apache Software License
Classifier: Operating System :: OS Independent
Classifier: Programming Language :: Python :: 3.7
Classifier: Topic :: Scientific/Engineering :: Artificial Intelligence
Classifier: Topic :: Scientific/Engineering :: Bio-Informatics
Classifier: Topic :: Software Development
Requires-Python: >=3.7
Requires-Dist: biopython (<2,>=1.78)
Requires-Dist: fair-esm (==0.4.0)
Requires-Dist: numpy (<1.19,>=1.16)
Requires-Dist: pandas (>=1.2.3)
Requires-Dist: pytorch-lightning (>=1.3.3)
Requires-Dist: ray (>=1.4.0)
Requires-Dist: scikit-learn (>=0.22.2)
Requires-Dist: torch (<1.9,>=1.7.0)
Requires-Dist: torchmetrics (<0.5,>=0.3.2)
Requires-Dist: tqdm (>=4.60.0)
Requires-Dist: transformers (<4.9,>=4.8)
Description-Content-Type: text/markdown
License-File: LICENSE
[Description omitted; length: 12719 characters]

WHEEL

Wheel-Version: 1.0
Generator: bdist_wheel (0.37.1)
Root-Is-Purelib: true
Tag: py3-none-any

RECORD

Path Digest Size
biotransformers/__init__.py sha256=jjHhog7WkVTlAEKaHcsXjuccBY7oCmwEe5cFHFjpMtE 219
biotransformers/bio_transformers.py sha256=T7-m5jMc63XiPKs7SwHssBwxEKGO2emspEmOkdnwL_M 2368
biotransformers/version.py sha256=CQKgFdKOd8j2eckBUFbwPNJt1oASUfatjq5eO0eF8cA 19
biotransformers/lightning_utils/__init__.py sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU 0
biotransformers/lightning_utils/data.py sha256=BAA3HFIXBi8KTh6KOoOozM_xT-csIV5l5dKz4xQudDo 16074
biotransformers/lightning_utils/models.py sha256=YIPLl7xurLMk-oAJSxvOz4mnWjVtSD_F-sMIElwB9p0 4502
biotransformers/lightning_utils/optimizer.py sha256=h4Z6haAMwKLGgOqxlWsIx8TJAvGY8XKE9ING9iHS5gg 892
biotransformers/tests/__init__.py sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU 0
biotransformers/tests/conftest.py sha256=cOBJuxL-5SvPpu4xria13QfzPNVF0L-L3kJIHwgAz6M 3400
biotransformers/tests/test_accuracy.py sha256=Z-NUHKJgYwfnPRAer8d6i3WpyQy8W5U5U7T7Vr9oCfA 1002
biotransformers/tests/test_embeddings.py sha256=k4D6xN9s-qw2xplxRbZ6Ns5NKgHKlJ7os9yp86ohcHU 1555
biotransformers/tests/test_logits.py sha256=YbxKUHH0VqTgTcRnDAidBLgOXGRBhv2bxoE7h5oHFLg 1034
biotransformers/tests/test_loglikelihoods.py sha256=QDUnGXIGtdqLgQWc4GlHr9XPQ_9U1SwwJofHus9ZK50 1894
biotransformers/tests/test_mutation_score.py sha256=V-Y9nuRiBeLkXPXmEdqkJoqP6_0ZLuMZFNc9zzIeakw 742
biotransformers/utils/__init__.py sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU 0
biotransformers/utils/compute_utils.py sha256=lq5JEn5kHVz1K63T-yDzZlN89Jifd5-enzvQrW0RwmY 4289
biotransformers/utils/constant.py sha256=se7yBfpHWcXqwQjkYwF84D8AafW-GQvl58NbClfzX4g 634
biotransformers/utils/deprecated.py sha256=_yb4V0p8VE9obbiflLd0G4vu4q4l_Tu-aow5unNV9uM 1181
biotransformers/utils/logger.py sha256=48u2pmi7GkZj9TU4k60Imz1pANynqX0D6y3au8HwDRQ 1085
biotransformers/utils/msa_utils.py sha256=_US2SRx47POlvCy5JpArd9EvepegOkGjz3deV9GwClQ 4316
biotransformers/utils/tqdm_utils.py sha256=MpqVKNUTUs4CCGvAC7GIt_tBCzf6c9AhkK_A6iwU73I 2754
biotransformers/utils/utils.py sha256=ntHaiXUbB94cJFiuTN6F5RPYW-2aJKLy3VgZQNIuMak 9138
biotransformers/wrappers/__init__.py sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU 0
biotransformers/wrappers/esm_wrappers.py sha256=DeeJaEpbqj0FNed7e8hQgGRAg4LdmwNTeWN7tKFAhkM 7352
biotransformers/wrappers/language_model.py sha256=VYt9VhbUa6yF3mCyxf6XDM0mmH45NnKh1e1MoOmeT58 3683
biotransformers/wrappers/rostlab_wrapper.py sha256=rCMaJUhjoViVxkW55BX2wJ_xftsQMSdxj38EOx7bOe4 7202
biotransformers/wrappers/transformers_wrappers.py sha256=2HAbWz8oEGTu7XwW8KxniBhYeggXVoI2krnt68M3VZQ 42146
bio_transformers-0.1.17.dist-info/LICENSE sha256=xx0jnfkXJvxRnG63LTGOxlggYnIysveWIZ6H3PNdCrQ 11357
bio_transformers-0.1.17.dist-info/METADATA sha256=EcYnxVMcgvObUqqa2j2LcUtGx2gaPyiigvnja1Ncy38 13839
bio_transformers-0.1.17.dist-info/WHEEL sha256=G16H4A3IeoQmnOrYV4ueZGKSjhipXx8zc8nu9FGlvMA 92
bio_transformers-0.1.17.dist-info/top_level.txt sha256=MnIJShciiNDmPd2bUmMqjIfu3Nhqfaj1n8rSpQosQiE 16
bio_transformers-0.1.17.dist-info/RECORD — —

top_level.txt

biotransformers