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1.7.1

bio-1.7.1-py3-none-any.whl

Wheel Details

Project:	bio
Version:	1.7.1
Filename:	bio-1.7.1-py3-none-any.whl
Download:	[link]
Size:	280992
MD5:	e7fbecf84a60184a1ae4203b458652ed
SHA256:	851545804b08413a3f27fd5131edefc30acfdee513919eebabb29678d8632218
Uploaded:	2024-05-29 16:32:56 +0000

dist-info

METADATA · WHEEL · RECORD · entry_points.txt

METADATA

WHEEL

RECORD

Path	Digest	Size
biorun/__about__.py	sha256=BW4qybE08xtGCy_MqP47AytqDxkN53xLquj4nTT01dw	134
biorun/__init__.py	sha256=jk3DZug07lIe5-E0XNaCWWHRZD24l10ZzXJ3E2b0nPk	710
biorun/__main__.py	sha256=zb5ikfWTCdTWf2nS2lo5fKXWAUNUPv7GYIYHOjOkpQs	250
biorun/align.py	sha256=rSruQzuQVqOCagBhsUA4nOCdrSTu6gJEpfMquhjgZFk	7599
biorun/code.py	sha256=i7z99ZQPjcsOagfns4u1UNNTTSh0lVr-Y2KfvSGv1bI	1679
biorun/combine.py	sha256=3z2OOt3YdirRyPwpH6HvCD79Gr-atwpwn0tCmpSo88A	2533
biorun/comm.py	sha256=4_uIJpqdRhvzuuQFISgbW33Ggpsr1QJXCtBI4v4KxfM	3403
biorun/convert.py	sha256=k0K_BXlWmoiR-PHDlXFwxzcdKe3-RVcGEYcgc0hfCYo	10913
biorun/enrichr.py	sha256=eEJgOqsEJIVseClo4iVpKhg6X0zSPtlXQBPeTU_Idfw	3271
biorun/fasta.py	sha256=71GGl6XctSvvJm9ut0Ef-wb-5rtina7P9hdKKCNQ6e8	1472
biorun/fetch.py	sha256=99b-aObo41VGaaTsKNdJOsFNhC6oK0FVeN_l9cLtWxE	10244
biorun/format.py	sha256=XRC1XaN2QQUmjJoJBzi1QKfNiDsSCSwKrBW4jrFAW44	1913
biorun/gff.py	sha256=ALJWt4VICdrA40UcbjNQfdjLagOgqQtA0bQVO8jQBg8	727
biorun/gprof.py	sha256=BUIBaM51E5JBHj817hmHhIZW7Tl3_Al-Ltsq3P4-Nn0	1840
biorun/gtf.py	sha256=f4gXx45hnvp39fhEZg-V5Dua6QQPnohP0iIEcg1m9us	2632
biorun/jsonrec.py	sha256=3bBA7xLydUGRgQiFIxHKok5-R4onuLmHW-SBSyn_TtM	999
biorun/main.py	sha256=pKkvx9rjQ7TnnTz2ojaaVXWzQl7nCYCI-A1kmiBVeTQ	5552
biorun/mart.py	sha256=Z5ZsTM_tbyAh8zpIE7H9Sd-jTK0pDNH4GgyenTBNe_k	1669
biorun/meta.py	sha256=r-8yYHPXxepvfRmfEZOXNZGX6l7GlL4_sE6ogWPpFK8	1890
biorun/models.py	sha256=FKSswoVe41Pdfst2ALsrwkK9BLUxLVr7CJFSKoZQa38	9986
biorun/mygene.py	sha256=bW-6Hxg4t5Q7jIP8_qTSxaHbQ4MLAvy_uUz9iqwP9yc	1741
biorun/ontology.py	sha256=XhZ_hjgYstbUBrX2gFWTHFcSpXDnH5ucb-ynAvHfP7s	13618
biorun/parser.py	sha256=fgi8oZ1eU-PYaQXw5jXbUzQCyqO2lcqx6yIEgx_8mWM	11322
biorun/patterns.py	sha256=VccBIsnT9ZzyFC5Nacnm3TCGs4yKpah0x-EKhZ-cNKM	243
biorun/search.py	sha256=isS_hckdw78ZI1Lo1JAl65diulzOB4as0WWiwbRLOuo	11124
biorun/search2.py	sha256=eNCeJhKs_KDtx9dF_Zd5EV-KjrqJsWiHPdMXFYsckRE	2079
biorun/table.py	sha256=3MWxPkvMmCGCB_MGN1UCJvDJi03MTYgFby2Lrbj0Q1U	992
biorun/taxon.py	sha256=UxEpRNUzUK8sVm7UMmnHyziKLi4Xvr4UjPzgRVa5AtA	15408
biorun/test.py	sha256=M_6qq7cggj3eOpOHvbO2iNzXSJmt2OybnnfvRa8pCiU	2752
biorun/uniq.py	sha256=_AKgCviWLU8UCWRS_Rwip5gVzOK5oESXBjk_r7oKfyo	1626
biorun/utils.py	sha256=gnU40RYxOzgOojsHqk_6FOu9yOPYh1hFLwImf91ZYVU	12175
biorun/variant.py	sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU	0
biorun/vcf2fasta.py	sha256=UQYiXESpOWCydGMKNayEKOeiUu5mW1_CVzj17I2kRp4	3857
biorun/api/__init__.py	sha256=QW_YfvKnUTfCe1pHiFNLXJlKd28XH5hea8iq-G7j0Vs	54
biorun/api/ena.py	sha256=jwsxX1IdB3BYE7N8cgvOqhRKM8SpsxFyOZUxcxnReuw	713
biorun/api/ena_fastq.py	sha256=qCaeQv6CwJTOkybJQ5SGoNFmqqFyz0Bvlg5lqw22IDc	1842
biorun/api/ncbi_datasets.py	sha256=VjfPr9l8pqM-xDq8020qGMymmktP4FNtl-18y3JpdG8	161
biorun/data/BLASTN	sha256=FDsYSTNtohlCBTousptte2V2h0drppXEKhu1ckAL_AU	187
biorun/data/alias.txt	sha256=FdOPpHQrccdL7GgzjjmeC7n0YcVjhvNAQi_Kt1JSMUw	119
biorun/data/align_default.diff	sha256=0Ix4sAx6k41zvWQmd4aPaJdvuULWJpmUSb0G6GOZUWE	52
biorun/data/align_default.txt	sha256=hHeYc6o07lDi31xhdUflFDhfqJZpbEXs5W5P76-Mt70	163
biorun/data/align_default.vcf	sha256=BsqZQ67NiogUtFlNCEy8TXe2bT7Uscle88ldNLt0RCQ	383
biorun/data/align_global.txt	sha256=nX8KRVqOv3kv-QKClPkAmeuIqgz29N0qWMBIw6N3OYU	160
biorun/data/align_input.fa	sha256=d5-v4Kq0Os8ewih0nV3xPlahV1yuJUspt_Y3niPWVpI	395
biorun/data/align_input.vcf	sha256=zsmC7-inlrqfR8fS-wxeMayzQQt2kv9ELqbSoLlGEhE	762
biorun/data/align_local.txt	sha256=-mv6hWWwoJOxEZn6NF1sCS7Tz1HwJP2yVrqsVS1JOlY	147
biorun/data/align_pile1.txt	sha256=1uyeKUB-MQtYOve9gIRG4dkPRRTtcSCpbYg7cJ6tvbo	73
biorun/data/align_s.tsv	sha256=pMA4BPOaR4BVgpRTzVm69VVOXFulJwCl7APl0zTDbeE	91
biorun/data/align_s.txt	sha256=NDCK5lp96JubH_wrXjnl5bqBiC9rhHqai4B-kgiBSfQ	4050
biorun/data/align_s.vcf	sha256=9lDwnc7r3dvq5gmUO9BMqeMPi-1vA_JVKnOwQqt75b4	2008
biorun/data/comm0.txt	sha256=4YS65M57S_GJ7btGSnkZb-AF6bvmd_34OSfO41nWVp0	4
biorun/data/comm1.txt	sha256=wM3nf6j--X1HbBCq09LVT8wvM2FA0HNlHC3Mzx43n9Y	2
biorun/data/comm2.txt	sha256=fER6olJCZKPiTfc6b93Y2zYIQPiVvLXlTWQ8GN4mqK4	2
biorun/data/explain_exon.txt	sha256=u-ML2RYvik_pVQaGJdh-9d-X1ke6ZlFJIEc3HTHyVLM	379
biorun/data/explain_food.txt	sha256=gdFu0G8KCkjiVebVM2pEEc25Xqfh5t8WzpCJAsyaxTI	191
biorun/data/explain_neutral.txt	sha256=j-0nNwjkEJUbGEnYEjyI3Sy2uJlGwvSLkY7arkVtlAg	1208
biorun/data/fasta_alias1.fa	sha256=19J0zpcniKsckQFBtpPTFf0pBmT_2xPMPn5OEn9sz60	405
biorun/data/fasta_all1.fa	sha256=KbTSHrGv7Mvrcwkwgc7MuwkFMPB6xc_UfvrMpZnXbqQ	8297
biorun/data/fasta_all2.fa	sha256=KbTSHrGv7Mvrcwkwgc7MuwkFMPB6xc_UfvrMpZnXbqQ	8297
biorun/data/fasta_all3.fa	sha256=KbTSHrGv7Mvrcwkwgc7MuwkFMPB6xc_UfvrMpZnXbqQ	8297
biorun/data/fasta_cds.fa	sha256=i6Mfy4hc563X4f3qwPEsT8Bi9NaXBKLSz_nl2Tr9qMQ	2379
biorun/data/fasta_frame.fa	sha256=LZtoaLB4V4i6_iIbuICESAF7aXS-sDcuQRwE5B1iAbk	8
biorun/data/fasta_ids.fa	sha256=vSc0F495DeCkg9UsHF4oK7Sa6Ppl-SGw1jzzKMmHR3U	154
biorun/data/fasta_match.fa	sha256=ddjhsQ9ZtfaZdf24WRgn2Vbj-YWPlRBvmL2MH8EvVfI	327
biorun/data/fasta_multi.fa	sha256=Yxlev7ss0XCtqZFB8bKYqNIg-8y1ONrPpHWg5svjgpA	53
biorun/data/fasta_olap1.fa	sha256=TFh-AUxdKakwx3D9itQZAl22rCIJmXT5LaCyC4ldACA	221
biorun/data/fasta_protein.fa	sha256=qrJ4reaQR11lSlK8fNDljCYlehPKtERmoJA8eQelYc8	26397
biorun/data/fasta_rename1.fa	sha256=IsJ3MtSy18sAsEEiwuMDp0EUku1rMlF5l1Th9dv9mfo	410
biorun/data/fasta_s.fa	sha256=K2LEp1sY5a5_By4Vz5z_7Tm-ADuBKomE7WL_jUIzn_g	2776
biorun/data/fasta_start.fa	sha256=Pq_6ARex7Qrq_H1jgdl85zIeVYzE83urfiWBmsDaePQ	2313
biorun/data/fasta_stop.fa	sha256=KXpf15x0GM0fwDDP33bgZjpV3UqCOIIUyDnwUYGyltE	2225
biorun/data/fasta_translate.fa	sha256=Y_KCXJpp6JLknI8-UICx_C0-aH5BmRsTrJdawUloQVM	26419
biorun/data/fetch_enst.txt	sha256=fr0Nz80a0GJcNGqhfQRqrJV41yABpDCm63b7CWJIAew	193482
biorun/data/fetch_gff.gff	sha256=aigzeTiVAOdtstElucd9mNkdR42UVWgxT32bYZwlOKY	14719
biorun/data/fetch_prot.fa	sha256=pzHnw-Mr6DVWA_RoRo6SG59n2CioGYiLXz5GELESVm0	9137
biorun/data/file1.txt	sha256=S3lkvRw9LbmaJqNGxrfdZorEPtJj5K04DQMOODfi18o	12
biorun/data/file2.txt	sha256=DZCAfG3_jXb-BIxhThLpuMQvzGGJ98ChrPlaijaCVsE	12
biorun/data/format_mafft1.diff.txt	sha256=jJzPhhMm2sUGTUefP9HrGbjRiW6q-Qps-NcAZFL_Hdg	308
biorun/data/format_mafft1.txt	sha256=eGQ7ZC5R7w35lNETcRpj1xxcS3oOQGKg-aBs0_lgex8	677
biorun/data/format_mafft1.vcf	sha256=vIbI817_7vOVJlzXDhCNAVXpuNhXSsyvlu3xtPpURm0	760
biorun/data/genomes.fa	sha256=qzka6LlKrgNbsTdiF63bg828psfwjltwjt4D5-P9usQ	369
biorun/data/genomes.gb	sha256=3zPzV9Ic2l4biLgAQdFGeaJxs8B79i6Y88prX_M3V-M	135161
biorun/data/genomes.json	sha256=2-48d2iLKHYlBNoREHrnmgULQrHj9Mf-stJddJnCHAo	161771
biorun/data/gff_CDS.gff	sha256=zGqGVB72iFYE4Xj2tVENj9Z20yguX0SeSNi5IowsDTk	1918
biorun/data/gff_all.gff	sha256=9D7ASlVFHernYKNV50OuZOi54KmCFGlXAAj0GibBW24	7872
biorun/data/gff_olap1.gff	sha256=kCzkuMucz3jMJeeJ2YZkrRCIv2aBd8Zt-3bneL74nBA	316
biorun/data/gff_slice.gff	sha256=O21dgpcAkGq3P8gmffYAcoLxcMDOt2hzCHu77Z-PM_M	542
biorun/data/ids.txt	sha256=-rmqJG3JK1kFZ2HceIBTNbJCYGL0jNhf6vtLJyfXask	97
biorun/data/lineage.txt	sha256=d5wv6NPAFPvBShT7tLF0gVz9XM28sCZbCTUGkVW9oqQ	1191
biorun/data/mafft.fa	sha256=x4-ab158jTBE-OAxFbT1AMVY_cXw-PgCsp_KqMJ_M00	410
biorun/data/meta.txt	sha256=jIQuMUELc1GJ5-oGtMZPJNpykbQtNgj8eivieMcfPAk	2044
biorun/data/nodiff.txt	sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU	0
biorun/data/search_assembly.json	sha256=Uieh0loZo0HMG4xkYxF_nZpVYOgTrlIdoDNoWAUu-9Y	902
biorun/data/search_mygene.json	sha256=AhXEzb7rQQOZ212hVEw9LqzwPlhnRxVbcg8XTcI_u90	438
biorun/data/search_prjn.json	sha256=QXSnF9ltC_rLs7_RQCkju0FJjVfZ-sjy1joV3h2FR-U	6873
biorun/data/search_prjn.txt	sha256=isXquqFKiJQyCUtzWRvLua2-W7aKrHQMK9H-NTwYQVw	975
biorun/data/search_srr.json	sha256=Hua6uWiqe6xv8u4YxirudSqdbDKu6BMM692RKWUuujA	1097
biorun/data/table_1.txt	sha256=Y7YlocKH_Kl-poJ7gxDrGNoL_ijoHd5krkLkJDJC9ys	80
biorun/data/table_2.txt	sha256=HiCmxsCOISPPKO1YiKqOELFzZib3WkogI1deejZ8T04	2333
biorun/data/taxids.txt	sha256=bgUjJiBtD7ci2TcYAeFYt-VsuCVg_CQ08vFV_ItLMNg	13
biorun/data/taxon1.txt	sha256=D5p5iXvCMzmMbyJ1sbH-5C4wOk8f5ycCRt020jBdIJo	581
biorun/data/uniq0.txt	sha256=p_XPGf23eScrEr7RcTTGDRjUZP3f2lmbinD9xcqxhdE	8
biorun/data/uniq1.txt	sha256=HSB--quXoZ_Dl8ngLfwYyC6mcaEGL3OrwE1vVRz4CfU	10
biorun/data/uniq3.txt	sha256=aJ57hQIXfM0czYz5ySFrGZfWpymq6Ebn6qSFaLCs6-4	20
biorun/data/usage.sh	sha256=mjEdFPeo_ehe-kSBeHxXC70-9ekI2yYUGJDJEbJ0Rlk	4614
biorun/data/weird.fa	sha256=8kb-svfQrhzyS68S5lPYuwWXGDlXjR7qWpc3oc_ybGY	56
biorun/libs/README.md	sha256=IIvuW6O8omvGgFavHtF0s5M2wP5TS_-LljhkzzPl-lA	21
biorun/libs/__init__.py	sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU	0
biorun/libs/placlib.py	sha256=9kr6xFUXgtAVke9Q-0wnUKDGCuAyZLwEk9yW5Tlm9HM	15874
biorun/libs/sqlitedict.py	sha256=Se2cIJ8dUzinb2rOxEJKOtnKUZoEPgKPyC53gP6wC3E	20944
biorun/libs/xmltodict.py	sha256=hw-KPQFVEkfMMkgvVhuywi0Szo3NKpatL1UQxLBPPe0	19058
biorun/scripts/__init__.py	sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU	0
biorun/scripts/fasta_filter.py	sha256=caMs2Lw9OW31oyXG-DN8qwr13zCF3mgf5hUbwpkjpmU	1554
biorun/tests/__init__.py	sha256=zWXrLXZKuj04k6kotaT9g9kHecHVwV5oCEYhu2ejvtI	112
bio-1.7.1.dist-info/METADATA	sha256=7AwX0elg4FFb_4PgUwHxooBzNx71SbpZ71jND3S85f8	5683
bio-1.7.1.dist-info/WHEEL	sha256=zEMcRr9Kr03x1ozGwg5v9NQBKn3kndp6LSoSlVg-jhU	87
bio-1.7.1.dist-info/entry_points.txt	sha256=IYOkeg4W7ny7-rJ1TbBfSBhV9uZzF1ijR3c7GaDvm0s	94
bio-1.7.1.dist-info/licenses/LICENSE	sha256=WDIr4SDHLOrG6ZmkFf_10FFIGvyJNi5_ewgWr7gpaec	1070
bio-1.7.1.dist-info/RECORD	—	—

entry_points.txt