alphastats

View on PyPIReverse Dependencies (0)

0.6.9 alphastats-0.6.9-py3-none-any.whl

Wheel Details

Project: alphastats
Version: 0.6.9
Filename: alphastats-0.6.9-py3-none-any.whl
Download: [link]
Size: 2861569
MD5: 2ebf6f1c5c4894fa56de3d33e1b3c716
SHA256: 15085a350d98528754aa695f053aa04340371e42caa74f21fda20e859f7bf167
Uploaded: 2024-09-20 13:42:56 +0000

dist-info

METADATA

Metadata-Version: 2.1
Name: alphastats
Version: 0.6.9
Summary: An open-source Python package for automated and scalable statistical analysis of mass spectrometry-based proteomics
Author: Mann Labs
Author-Email: elena.krismer[at]gmail.com
Home-Page: https://github.com/MannLabs/alphastats
Project-Url: Mann Labs at MPIB, https://www.biochem.mpg.de/mann
Project-Url: GitHub, https://github.com/MannLabs/alphapeptstats
Project-Url: ReadTheDocs, https://mannlabs.github.io/alphapeptstats/
Project-Url: PyPi, https://pypi.org/project/alphastats/
License: Apache
Keywords: bioinformatics,software,mass spectometry
Classifier: Development Status :: 1 - Planning
Classifier: Intended Audience :: Science/Research
Classifier: License :: OSI Approved :: Apache Software License
Classifier: Operating System :: OS Independent
Classifier: Programming Language :: Python :: 3
Classifier: Topic :: Scientific/Engineering :: Bio-Informatics
Requires-Python: >=3.8,<4
Requires-Dist: pandas (==2.0.2)
Requires-Dist: scikit-learn (==1.2.2)
Requires-Dist: data-cache (>=0.1.6)
Requires-Dist: plotly (==5.15.0)
Requires-Dist: statsmodels (==0.14.0)
Requires-Dist: sklearn-pandas (==2.2.0)
Requires-Dist: pingouin (==0.5.3)
Requires-Dist: scipy (==1.10.1)
Requires-Dist: tqdm (>=4.64.0)
Requires-Dist: diffxpy (==0.7.4)
Requires-Dist: anndata (==0.9.1)
Requires-Dist: umap-learn (==0.5.3)
Requires-Dist: streamlit (==1.22.0)
Requires-Dist: tables (==3.7.0)
Requires-Dist: numpy (==1.23.5)
Requires-Dist: numba (==0.56.4)
Requires-Dist: numba-stats (==0.5.0)
Requires-Dist: swifter (==1.2.0)
Requires-Dist: click (==8.0.1)
Requires-Dist: kaleido (==0.2.1)
Requires-Dist: combat (==0.3.3)
Requires-Dist: xlsxwriter (==3.1.0)
Requires-Dist: pyteomics (==4.6.0)
Requires-Dist: openpyxl (>=3.0.10)
Requires-Dist: nbformat (>=5.0)
Description-Content-Type: text/markdown
License-File: LICENSE.txt
[Description omitted; length: 5207 characters]

WHEEL

Wheel-Version: 1.0
Generator: setuptools (75.1.0)
Root-Is-Purelib: true
Tag: py3-none-any

RECORD

Path Digest Size
alphastats/DataSet.py sha256=mEZ4H283z8_IKT2YJc3oBKF4qrR5Yt0QIOLYp6Lb0ys 9024
alphastats/DataSet_Pathway.py sha256=qWitbmOlqhzRkXEI8WaDg32ShuK7Yn-4MV8h3sjfcTs 19551
alphastats/DataSet_Plot.py sha256=uNqn15jTx9judrc8HFJCtQO8fHKcJ7j-YE-1qr-CqnU 13960
alphastats/DataSet_Preprocess.py sha256=lKBbaWMXi17SAT0Hm7khZl_n_WzXz4cj0c1atgMPfTE 13420
alphastats/DataSet_Statistics.py sha256=h6oJd3eUGfY0q5_rq43-7IS-h_btJ8wUEjTvMtG1S8w 9082
alphastats/__init__.py sha256=e-npe3eh-81Qf8ZOX8yFg8DlrpzA3J8G8N0Gwz7gjD8 1573
alphastats/__main__.py sha256=GIenC0Pt0XF93PUYjqrevjcFXSidfUaMZykzknr0-ak 109
alphastats/cli.py sha256=JsYTLKLLJp8LujLFte2sxnD6giIsWLzabmnHmiq9fBY 83
alphastats/load_data.py sha256=jIv5dUHhVqsUhHRUdwZIbnLuQeap32tjh_URxWfewB8 761
alphastats/utils.py sha256=Dzid8ofu3ty9R52QcHyZDa0W7EX5XlON5NJCk00jjJQ 2497
alphastats/data/contaminations.txt sha256=58vsxv6dvbLwPUlEte5GjDIE559TiP-v8PNnZSaI4OM 70534
alphastats/gui/AlphaPeptStats.py sha256=Z30tfcG6OKcvflvihfcq_9BncE-E1D-HX3UvLg6iIuo 2494
alphastats/gui/__init__.py sha256=Fqk8Sx5flnVFCzV-kYYfUMiTNvlTFwZFAHjH8hNZ9Fs 21
alphastats/gui/alphapeptstats_logo.png sha256=Phn-HTWifas0F-hBLi4xERAaysrOMuEF0P5dy4Peg_E 31042
alphastats/gui/alphastats_logo.png sha256=WnH_YYRUDYMNJ8L3zyuy4nVd37d6ofcpV_9Gzf5wk4M 30529
alphastats/gui/alphastats_logo_2.png sha256=hkPIbHCwZbTNkreWMGMFQynsQb1kVZS0OgBBRhfAUig 20433
alphastats/gui/gui.py sha256=0_nnZpU7xqCarjhHjX7DLbp6vYufScJS97pRZQTL9lk 771
alphastats/gui/requirements.txt sha256=DAbVxU0vLFSwqxi3zyhJ9cXEw86j47_R-mNT5R7o3PE 51
alphastats/gui/.streamlit/config.toml sha256=tqAc0k7-Xs4JQkokSO_7OplFXT6CxxvKNwL4oRjeKD4 526
alphastats/gui/pages/02_Import Data.py sha256=DG3hKFUsx9ZvxRbsAeTk2Thf2XSh91ABrY9HbNlOM5k 14710
alphastats/gui/pages/03_Data Overview.py sha256=5q_jjRq4FWHgTN3xMMMgsh0qOCYMSs-Lue4xI0U6G24 2397
alphastats/gui/pages/03_Preprocessing.py sha256=41lEEsk6LTDwaDpISxD4UczcN9UL50yNX1X55jyqoGc 4937
alphastats/gui/pages/04_Analysis.py sha256=2MuYAjOn6eMgHqCbL7UGuDytby61Gj8f15frzB0EKvI 5480
alphastats/gui/pages/06_Results.py sha256=glac4tfqLb9V0D0_-L3RHMOwXd651TgISnsw7HuKg-I 1766
alphastats/gui/sample_data/metadata.xlsx sha256=9AzM4OlEXqc14Lhu1wqmju81yrhcF5JCZvqttIEUl5Y 26661
alphastats/gui/sample_data/proteinGroups.txt sha256=9OS-T8v4KyqeCQe4tc9SilxQmCI7SDsx_lW8E-wn3o8 9509624
alphastats/gui/utils/analysis_helper.py sha256=EgNW6QF7fqlK0bcXaJqCMEjrM2GQrENzr3mvH64XepQ 10474
alphastats/gui/utils/options.py sha256=D4qIESCfIjnt2vYwmo-ysRuTzZOQM6f0jNZ80iAvrGM 4246
alphastats/gui/utils/software_options.py sha256=clP-UuqdJ7_Fsr7Kwi8S-0C41vGlQV_9eGmqztN8g7Y 2178
alphastats/gui/utils/ui_helper.py sha256=MY4IYI8u5TUNQNLjOEJR82W5gC_md_OTz0tv7tgr4j4 1785
alphastats/loader/AlphaPeptLoader.py sha256=yTj7QelUc2S1DCAwUpIujP4D_INuQ35Ls4QRnAFCRcc 3861
alphastats/loader/BaseLoader.py sha256=jNzHrC06hyDSsokbHGipi_MHlci0asdnxVqSvDi1aew 3576
alphastats/loader/DIANNLoader.py sha256=xxqc7NuUG3euyDTqJFgr-bTmaETz8pDO8cGeJMyvgqQ 2665
alphastats/loader/FragPipeLoader.py sha256=J0fF2vP0hKfIu6AgPh3tMVkUCOVbeW2Kxl-FJlljLVE 1394
alphastats/loader/GenericLoader.py sha256=izgM3sWJlCYmMy99gEoQW06kzp96yMt5kfLEvxrn5YM 2295
alphastats/loader/MaxQuantLoader.py sha256=oelbkyD72S5HeItrgqSPINWeYiYdLHGKzvWSWZe-6oI 3240
alphastats/loader/SpectronautLoader.py sha256=1ZVk9gO4tmgR1gZLp7CXYXgXXV0c7z1GVLCz1l1CYnQ 4605
alphastats/loader/__init__.py sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU 0
alphastats/loader/mzTabLoader.py sha256=p2nWm07hFooQqX8OOaW4Uyn7ucXeOIzzopDBWAprjBk 1205
alphastats/multicova/__init__.py sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU 0
alphastats/multicova/multicova.py sha256=N3cJh1PJi9wF4xUu3R8xUGpVDQfbdxV44UGAj5ogKUA 29725
alphastats/plots/ClusterMap.py sha256=fVcsQ3LBSRsKo5l_Dl6Db10TsEb42oGAG-XvRbj8AqE 2656
alphastats/plots/DimensionalityReduction.py sha256=rgNEjitEbPWPbBA31j1e1v5SjsiclNTe9Una-adnJPI 5124
alphastats/plots/IntensityPlot.py sha256=y9WNKNUveSW3eS1tTQ3n9SO9OHfUniRXrHF-K6DKQ7M 5652
alphastats/plots/PlotUtils.py sha256=xwY9BsZ0T6CK7Op2EGBlzULRs_dsVHUQv8y5kTwvF6o 1899
alphastats/plots/SampleHistogram.py sha256=uWQFhNFXzwgig_72nsg5IRfnNCXx_1gZR4nk_Jix3fg 1453
alphastats/plots/VolcanoPlot.py sha256=fIls9eWcSW7fZA10Z0oAIJI97JMOniuVjLrrpgtcd60 13580
alphastats/plots/__init__.py sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU 0
alphastats/statistics/Anova.py sha256=IC_K7MFMbl7xrWlFe4o7ARI74DEZa0QWjfpsMJBM848 2989
alphastats/statistics/DifferentialExpressionAnalysis.py sha256=LXEdzNmRuDEmKPdb5AEWgruDJm8ZoDIyTZ7m8fTItzA 8301
alphastats/statistics/MultiCovaAnalysis.py sha256=MXB0xS5UGFHcdxaUb1PfHiEzt0ajk6mtJReWkOBqVpM 4896
alphastats/statistics/StatisticUtils.py sha256=18LBwnbAq3hOW8X9YlvbT7OzPADU0jjd0Cq2IbCjn5k 918
alphastats-0.6.9.dist-info/LICENSE.txt sha256=oyflIMcfw3a5Oq6qDNwzW3Iip9-Wy8oxDRuiKMiHKW4 11338
alphastats-0.6.9.dist-info/METADATA sha256=e01DfBCSmHGfkjT9RAv1qxP4ziQmHKxgBAqEJ51ZBvk 7014
alphastats-0.6.9.dist-info/WHEEL sha256=GV9aMThwP_4oNCtvEC2ec3qUYutgWeAzklro_0m4WJQ 91
alphastats-0.6.9.dist-info/entry_points.txt sha256=RLRl9Xe0W1Y6E0bbbA7I8FqeDdv1qKC0sq_TvuQY1d8 54
alphastats-0.6.9.dist-info/top_level.txt sha256=7fJZ6WOGkybmDowtHCkR7sPSGlNeCMG6pz1w9rwx3_4 11
alphastats-0.6.9.dist-info/RECORD

top_level.txt

alphastats

entry_points.txt

alphastats = alphastats.gui.gui:run